SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427735837|ref|YP_007055381.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427735837|ref|YP_007055381.1|
Domain Number 1 Region: 20-318
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.08e-43
Family Filamentous hemagglutinin FhaB, secretion domain 0.02
Further Details:      
 
Domain Number 2 Region: 436-570
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000000000769
Family P22 tailspike protein 0.069
Further Details:      
 
Domain Number 3 Region: 329-433
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000000691
Family Filamentous hemagglutinin FhaB, secretion domain 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427735837|ref|YP_007055381.1|
Sequence length 816
Comment filamentous hemagglutinin family domain-containing protein [Rivularia sp. PCC 7116]
Sequence
MKGIAFLSGFVSSLFASGIILPAPAQVTSDGTTNTVVTSSGNNFNIIDGIQKGNNLFHSF
KEFSIPKGDSAVFNNSLDVVNIINRVTGGNISNIDGLVKANGNANLFLINPAGIVFGENA
KLDIGGSFLGSTAQSILFEDGFEFSAVNPQEKPLLTVSVPVGVQMGINPGAIEVNGNGHQ
LSASPREINRSNNTEGLRVKPGNTLALIGGDINLKGAILAVEEGRIELGSLGKSELASIS
AIDEGFTFDYTQVVSLGEIRLQEESLVDVSGDSAGAIQVKGGQVLLSDSSLLLSQNQGNQ
AGGEIRVDATDLLEIAGYNPTSEIRSGVSSETVGTGAGSDITVNTGRLIVREGGGISNQT
YATGDSGDIKIQASELVQVKDLNFTSFPQVNMANFLLDIFSATKSTGSGGNVMVSTPQLS
LTNGAVIGSVTQGNGIGGSLEIDADTIEISGNNSRRPTVLSTSSLLSGNAGDLKIKTRTL
TVRNSGLVSSSAVGQGNAGSVKIDASESVTLTGKVPKARSSSQIRSAVIFINPFFPIVPQ
GRGGSVIINTPSLNVTDEALVSVANQGIGDAGTIEVNAGSILLNSGGKIAASTASGEGGN
IDLQVRESLLLRRESAIEAQATGRAGNGGNLTINSPVIAGFENSDIIANAVAGNGGNINI
TTQGIFGLEFRDKLTEDSDITASSEFGVSGKVNINNISIDPNSGLTELPVDLADSSQQIA
SGCSSNPGNSFVATGRGGIPKNPNEQVDAKLIWSDIRDLSASRKPNNNSEITTISNKPAI
IEANGFIRNASGEIELVAAQNTPLKTQALNCSGIST
Download sequence
Identical sequences K9RBV9
WP_015118409.1.44015 gi|427735837|ref|YP_007055381.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]