SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427738146|ref|YP_007057690.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427738146|ref|YP_007057690.1|
Domain Number 1 Region: 53-336
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.02e-39
Family Pectate transeliminase 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427738146|ref|YP_007057690.1|
Sequence length 543
Comment nitrous oxidase accessory protein [Rivularia sp. PCC 7116]
Sequence
MRKFPTYSVLLLTATLTAVTSTLLSASSNTAVAQISSMSEKTIVSENSISQVNVLFVNPS
IGNDQNTNGSQNSPLKTITSALRMAKSNTVIKLAKGTYSAETGEKFPLILKKDISIQGDA
SNQGKEIIIQGGGEYLSRYYGSKNIGIVASGNAKLAGVTVMNPNPRGYGMWIESNSPVVE
TSTFTGSTQDGVAVTGKAAPKINNNYFYRNGANGITVSGKSQPEITQNTFQDTGFGINIA
QNASPQIISNKISHNRTGVVVQAASRPVLRNNSIFNNKEDGLVVIAKAVPDLGNSSNPGG
NQFNFNGRYDINAQAAKQEVAAYGNTVSNNRIAGKVNVTASAAPAKAVISQTPRRRPTLL
QPRANRQNTVASTPKPAIPKPQTEEQYNYVQVQPNTIEFTAPQAVAPRPSQLPENTPSLP
TLKPAPVGESGLLPVPTARIPVSRNGSANMPAPRVTNNPLPINNPPQIQARTTQVTSRYR
VIVEAVTSRQQELVRFIVPDAFRTRRRGRRVMQAGIFDDRTKANNLIRIFKNNGLKARLE
PMK
Download sequence
Identical sequences K9RI55
gi|427738146|ref|YP_007057690.1| WP_015120702.1.44015

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]