SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427739331|ref|YP_007058875.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427739331|ref|YP_007058875.1|
Domain Number 1 Region: 63-395
Classification Level Classification E-value
Superfamily Pectin lyase-like 2.35e-39
Family Filamentous hemagglutinin FhaB, secretion domain 0.015
Further Details:      
 
Domain Number 2 Region: 414-529
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000000000251
Family P22 tailspike protein 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427739331|ref|YP_007058875.1|
Sequence length 852
Comment filamentous hemagglutinin family domain-containing protein [Rivularia sp. PCC 7116]
Sequence
MRSTTYSDWSFGLKQFLLLIGISPLITVTLPVSAQTRITGDATLPTPTKINNLKSGIYEI
TGGSRPENAVNLFHSLQEFSIQSGDTARFTHDAAIKNILTRVTGGSASNINGTIQTWIDG
VKPSTANLFLINPQGIIFGQDAILNIGGSFIGSTAQTIKFADGAEFSAINPSSQSLLTIS
VPIGLQLGSQPNSSININGSGNNLKVSPADFSIDRSNRPSGLNYQNSSNQILALIGNEII
LDGGNITFPAGQIELWSVNQGEITLVNKNSNLELKATQGIEYGNINLFNAASIDTSGTSG
GSIQIKGKNISLQDASVIISDTLGSGSGGEINIFASESIAVKGFALQPNNQVFSSILADV
ATGASGNGGKINLETKILQVEDGGQISSGTFGSGNAGELNVKAKDIQMSGFSPFGPSAIA
TPVAPGATGNGGTLTIKTDSLQLTNAAQIFSSTFGFGKAGDLKIKAENIELNGGIPQGPS
SIVTAVQKIPGAPDFLGTGKGTGGDLNIETGSLRVINGAQISSSTSGSGTAGNLQIKADS
VELTGSNEFGRSGLLANAVVSNGEGGDLDLTTDKLIIRDRAAINASNFLSSDPENLRGLA
GSGTAGNINVNSPFILLENQGTITASTNAGDKGNINIESENLQLFQESNITSNARNSSNG
GNIFIDTDTLVGFQNSDITANATEGFGGQVTINAQGIFGIAQRFQLTPGSDITASSNRGA
EFNGVVELNTPDIDPNSGVNNLPATVVDADNYVSAGCAAQQGNNFLISNRGGLPHNPTTI
LRGANLWLDLRTASKKGEKVSSSDVRNSKPAIVEATGWVRGKDGELYLVANNQMGGGVDN
QSAYQALSCRGV
Download sequence
Identical sequences K9RLI1
gi|427739331|ref|YP_007058875.1| WP_015121880.1.44015

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]