SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427740183|ref|YP_007059727.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427740183|ref|YP_007059727.1|
Domain Number 1 Region: 1-582
Classification Level Classification E-value
Superfamily Prokaryotic type I DNA topoisomerase 9.55e-181
Family Prokaryotic type I DNA topoisomerase 0.00000000322
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427740183|ref|YP_007059727.1|
Sequence length 895
Comment DNA topoisomerase I [Rivularia sp. PCC 7116]
Sequence
MSTLVIVESPTKAKTIRNYLPSDYRVEASMGHVRDLPQSASEIPAAVKGEEWAKLGVNVE
SNFEPLYVVPKTKKQVVSQLKQALKEASELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITSEAIKKALKNTRTVDEQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVQRERERRAFNQGSYWDLKAVLSQTANKGSKEQSFNSVLVSLAGTKLATGSDF
DPATGKIAAGRKVVLLNEEEAEALKARITDKTWKVTNLDERPVTRKPAPPFTTSTLQQES
NRKLRLSARDTMRVAQNLYEQGYITYMRTDSVHLSEQAVTAARECVQKLYGNEFLSPQPR
KYTTKSKSAQEAHEAIRPAGSSFRTPQETGLSGRELQLYDLIWKRTVACQMADAKQTQIT
MHLLVEDAGFRSSGKRIDFPGFLRAYVEGSDDPEAALEDKEVILPNLKVGDNPSCKELQT
VGHETQPPARFTEATLVKTLESEGIGRPSTYASIIGTIVDKGYAQLTNNALIPSFTAFAV
TKLLETHFSEIVDPSFTSKMEQTLDDISTGEAEWLPYLKKFYLGEKGLDTLVKERESQID
INTSRTVDLNIPDVKIRIGKFGAYLEAENGDEVVTASIPRDLTPSDLDPEKVEKLLKQKT
EGPDQVGIHPETAQPIFMLIGPYGPYVQLGEKSEENPKPKQASLPKNVKPEDVTVEMAVG
LLALPRKLGEHPETGASVQANLGRFGPYVVHNAKEGKDYRSLKAGDDVLTVSLERALELL
SQPKKGRGSRSNAKKPLRELGSHPDNEEPVNIYEGPYGVYIKHGKTNVGIPEGETVESIT
LEKALELLANKAPKGKSTRKTTKSKTSSTKKSNSTKSKASSKTSTAKSKKKTETS
Download sequence
Identical sequences K9RMK9
WP_015122729.1.44015 gi|427740183|ref|YP_007059727.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]