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Domain assignment for Aech_06211 from Acromyrmex echinatior v3.8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Aech_06211
Domain Number 1 Region: 1062-1103
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000484
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 2 Region: 992-1030
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000314
Family LDL receptor-like module 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Aech_06211
Sequence length 1152
Comment [mRNA] locus=scaffold298:105647:109105:- [translate_table: standard]
Sequence
MNMQPVTTESADRLAIKPAVTIGNPILEAFPEETQRRRFPNSMLQKPSAYLIQITSKSKD
NNSSSQYVKFGRFHNLDTNCSNAEVYHPTVNQTLKRSSNESRIPKPFKLSDSLVRSLQLF
QQKNISLKNFGLQSINNRDKTRKMISGSNPDCAPKQSNTFNVDATIMILGPSKKGKYVTE
KNISKSNNSNIRTVIEISSKIDMEYQNSDKIKRTPTKLENNTSKNNIDNIKAIHRSKNIT
VEAAKNIDEEIDTENPLMIKKKSTDTVTQRIDNLICKFIKAKHMVCRQSDSTEVSIKPIY
TTSKITTVTNDANINRNFNMTDVRGNSKILRKNQRRKHGSAYQKYYDKYLRNLITSSTMK
VSTEFAVDTRTSTTLKNTFLKNINKHEVTKAWQTEKRDMLENVTGFIYSDVFNNTHGQSN
LPENYIETKNNNPNNKEIFFGYEVRKDSKVSNYYNKYLKHRVTPFKRTAPVTVSTKIEEY
NMTNMKYDQQKAASSVLGEIFATTKSNKNDYSSIKTEKLLYELKSPKAEIHRRYFPTINV
DNIDMISNLSISNHNATQQNRSNEKYNKTHKQSDISFEKCCDENLIQSNEKIDSGLINSG
ETPESIPIENTNTISKESHESREILEEKSEDDFDVVLFNFTTTRVPEIVTRDANEPREDP
EKTSTERHGKRKHKSRHNSRKNNRPKKRRKNHVKRKRKPTSSVASKVDEPTSVDYDSAYS
SERVKMLSPNDLEYNEADNRNTSTGGNDWYLTAEITTEPFKIESSNADESVSKHPTEDSI
DDEFQSEETNADLVTSSTISYLSTASNEKISKKCKILITTESNWLNWWTNDNKKTDEEST
ECEEDVTSLPTTSDSIEEETNYYSISVSDHFSIYNTISILDSTTLIWEYFSKENKNVSDE
EISTTFSMIKDEENNEKKVMVSESILNEESDKNNEGTQSWESITNFGGTTHNVNLDFNSE
EEEDGLEKSISDEDNEIDNGIAETIEDYEIDNCNETQHACDKYTCIDEDQVCDGIVNCLN
ANDETDCDYIYSKRWEEHQRINDKRIDFTSNTVDDTSHLDGCSPFEHPCDSMCINALHVC
DGKRDCLDGTDEENCTKGIPHVENNTLRETSHFTLCSRCKNYLALDGASRESQASVTSFR
DDLSSSLYRTWL
Download sequence
Identical sequences F4WJM8
Aech_06211

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