SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os03g14520.1|PACid:21911289 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  LOC_Os03g14520.1|PACid:21911289
Domain Number - Region: 45-106
Classification Level Classification E-value
Superfamily PH domain-like 0.04
Family VPS36 N-terminal domain-like 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os03g14520.1|PACid:21911289
Sequence length 232
Sequence
MAPGLQRFTDIAGDGGPRLDAASGEELLRMDRAASVALGRRAPEPPGTLFVTTRRVIWLS
ETEKGQGYAVDFLAITLHAVSRDLEAYPSPCIYTQIDAEDGSDEEAGGSDFEANGDLQLA
KVSEMRIILSDPGQLDALFDVFCHCAELNPDPNAVRNEENGWSGGENMAEGGWIHGDEDM
IDGNDLEAHMFFTNLIGQNGLHDLGRSVRELQIDDQRFEDAEEEDEIQENGH
Download sequence
Identical sequences Q10P28
39947.LOC_Os03g14520.1 LOC_Os03g14520.1|13103.m01698|protein XP_015628597.1.37577 LOC_Os03g14520.1|PACid:21911289

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]