SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os04g23600.1|PACid:21892754 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os04g23600.1|PACid:21892754
Domain Number 1 Region: 359-617
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 7.01e-63
Family Protein kinases, catalytic subunit 0.00029
Further Details:      
 
Domain Number 2 Region: 100-178,205-228
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.31e-25
Family alpha-D-mannose-specific plant lectins 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os04g23600.1|PACid:21892754
Sequence length 659
Sequence
MVVVTGQATLQVAAGTLPRQRSDYPMANLSTLWVNNRNRLPDSITYDDGSMVRSILLLSP
QTFYGPSFAAGFFCTPPCREFIFAVFIVFTSSGALFPVAVNEVIWCANRGSPLGEDATLE
LTGDGDLVLREKANGRLVWSSGTSGRSVQGMEITENGNLVLFDQRNGTVWQSFDHPTDAL
VPGQSLLQGMILKANTSPTNWTESKIYITILQDGVYGYVESTPPQLYYNYVVSTNKSKRV
PTTVTFTNGCFSIFVQSTQPGNPDGRIALPEAKSIQYIRGILLENNTTSNCYLQLYCLPQ
SATYSLFFCPYTKQKLQTKTILVSILAAIGALILVVVVAIYVQKRRKYRERDEELDFDIM
PGMPTRFSFQKLRKSTEDFSKKLGEGGFGSVYEGKISEEKVAVKRLESARQGKKEFLAEV
ETIGSIEHINLVRLIGVCVEKSNRLLVYEYMSRGSLDRWIYYHHNNAPLDWSTRCRIILD
IAKGLCYLHEECRRKIAHLDIKPQNILLDDNFNAKLADFGLSKLIDRDQSKFGVVLMEII
SGRKNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSNDMVSHQEEVIQMMKLAMWCLQ
NDSDRRPSMSMVVKVLEGAMRVENCLDYSFFNANSVISVQGIPSTYSAPPRASILSSPR
Download sequence
Identical sequences Q7XMC4
39947.LOC_Os04g23600.1 LOC_Os04g23600.1|13104.m02197|protein LOC_Os04g23600.1|PACid:21892754

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]