SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os05g40670.1|PACid:21939429 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  LOC_Os05g40670.1|PACid:21939429
Domain Number - Region: 420-475
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0729
Family PHD domain 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os05g40670.1|PACid:21939429
Sequence length 633
Sequence
MGHTYLHSTGGRCIVGARLSADDATGVRPVTDRSFLSTTCQFSMLHVCPSSYNDFLAMVA
MKPGMYLAGADVPTPGVPTPAPARDECLEALIIPTGRGEARKKEKDPHFFYEFDLDESKK
VKNLFWTDGRSREWYEKYGDVVSFDTTYFTNRYNLPFAPFVGISGHGNTIVFGCAFLHDE
TSETFKWMFRTFLKAMSQKEPKIIITDQDGAMRSAIAQVFQNAKHGNCFFHIVKKAFNLS
GNLFKAKEGLYDEYEDIINNSVTEEEFEYLWQEMIDSFEVQHINFLKHMWSIRKRFIPVY
FKGDFCPFIKSTALSEGTNSRFKNNVGPQYNITNFMIEYERVMDTIQNLEQFDDHISRTK
KPSKLWSHYYIEYQAMRMYNRKIFIKFQVELKRTTRFQINEVEKFKTYEVFLALNQNIQV
IRRRKYLVIVDLEKEDFNCICSKFEKDGLLCCHVLKVMLHLNAMKIPEKYIIERWTKKEY
KDAEQEINDSDPNAEDNLNSHEQGNQQSEENTEEILLDPDIAKSKGRPAQRYKTIREEIQ
QKELYHCSHFQRTDHTFPTCPLKHVEFDLPRKKRRKVKNTREQDGVEQKKKDVSNKRKDL
QQDISQEKHNSGDELEGKKKRNSSSSKRGGTKE
Download sequence
Identical sequences LOC_Os05g40670.1|13105.m04303|protein 39947.LOC_Os05g40670.1 LOC_Os05g40670.1|PACid:21939429

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]