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Domain assignment for LOC_Os06g34240.1|PACid:21929788 from Oryza sativa v193

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os06g34240.1|PACid:21929788
Domain Number 1 Region: 187-566
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.45e-105
Family Reverse transcriptase 0.0039
Further Details:      
 
Domain Number 2 Region: 740-844
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.22e-24
Family Retroviral integrase, catalytic domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOC_Os06g34240.1|PACid:21929788
Sequence length 860
Sequence
MGLTTQALTPAPTSLRGFGGEAVQVLGQAQLIVAFGTGENRREEQVLFYVVDIPYNYNAI
FDRATLNKFEVISHHNYLKLKMPGPAGVIVVKGLQPSVASKGDLAIINRAVHNVEAEPHD
RAKHAPKLAPHGKIVKMQIDDADPTKLVSLGSDMGEEEAKNILEVLKKNIHIFAWGPDEV
GGVSADLIMHRLAVKPDAKPRKQKLRKMSIDRQEAAKAEVQKLLKARVIQEIDHPEWLAN
PVLVRKSNGKWRMCVDFTDLNKACPKDDFPLPRIDQLMDSTAGCEPMSFLDAYSGYHQIR
MNPADIPKTASITPFSTFCQLRMPFGLRNARATFTRLVYKILYKQLGRNVEAYVDDIVIK
SRKAFDHASDLQETFDNLRAAGMKLNPEKCVFGVRAGKLLGFLVSERGIEANPEKIDAIQ
QMKPPSSSQVLADFVAKWTPAFAPEPEPIEQPWVMYSDGSWSHWGTGIAAVLTSPNGVPI
RYAARLQFDTTNNATEYEAILLGLRKVKALGVRRLLIRTDSKLVAGHVDKSFEAKEDGMK
KYLEAVRSMEKCFTGITVEHLPRGQNEEANALAKSAACGGSHSPGIFFEVLYTPCVPMDS
LEVMTIDQVELGEDPYDWRTPFVKHLETGWLPEDEAEAKRLQLRATKYKMVSGQLYRFGV
LQPLLCCISFAEGEEMAKEIHQGLCGAHQAARTVASKVFRQGVYWPTMLKACVEQIKKCE
SCQRYGRSQTVPQYELQPIAPIWPFARWGLDIIGPFPMARNGYKFAIVAVEYFSRWIEAE
PLGAIISAVVQKFVRKNTVCRFGAPKEFITDNGKQFDSDKFREMCERLNLEIRFASVAHP
SQMGRRTYKWQNPRSTKKKA
Download sequence
Identical sequences LOC_Os06g34240.1|13106.m03537|protein LOC_Os06g34240.1|PACid:21929788 39947.LOC_Os06g34240.1

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