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Domain assignment for LOC_Os08g22310.1|PACid:21890482 from Oryza sativa v193

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os08g22310.1|PACid:21890482
Domain Number 1 Region: 511-890
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 3.11e-98
Family Reverse transcriptase 0.00083
Further Details:      
 
Domain Number 2 Region: 1189-1332
Classification Level Classification E-value
Superfamily Ribonuclease H-like 4.55e-29
Family Retroviral integrase, catalytic domain 0.013
Further Details:      
 
Domain Number 3 Region: 918-1023
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.0000000000000115
Family Ribonuclease H 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os08g22310.1|PACid:21890482
Sequence length 1439
Sequence
MAAEEGAEPSASVAEDGEGQAPSQPPSAPAPSQPSSAPATSVQVPNTADVAKAAATARAL
QTRAENLSTNQLVVPQAAPSQPAAPTAPAVVQAQISLDPEAQAEADMEAMRQNMTRLQDM
LRQMQEQQQAYEATRRTKATSAAILQYSAGYAPPQVRPQVVTQPSPPLAAQPPVYFAGQH
QPPGQATQTVAEGASALQAQLQAFLQQLNQPHYISSTTPSAHPVGDTSQGAPNWLPPIQP
GSGPSPWSQGQQFDFGNTAQPIFDPSMAAQQVPPVGAGQSNAAAQLHAQAAISPFATPYP
QQANSIYSWEQLRDVFVLNFRGTYKEPKTQQHLLGIRQRPGESIREYMRRFSQARCQVQD
ITEASVINAASAGLLEGELTRKITNKEPQTLEHLLRIIDGFARGEEDSKRRSSTSSNCRS
TSPLCSPVSAGDPGTAAKETEPHERPKHTPKPTPHGKITKVQMDDADPTKLVSLGGDMGE
EEVESIQEVLKKNIDIFAWSPNEVGGVPADLIMHHLAVKPNIKPRKQKLRKMSADRQEAA
KTEVQKLLWAGVIQEIDQPEWLANPVLVRKSNGKWRMCVDFTDLNKIHMNPLDIPKTSFI
TPFGTFCHLRMPFGLRNAGATFARLVYKVLGKQLGRKVEAYVDDIVVKSRKAFDHAFDLQ
ETFDSLRAAGIKQNPEKCVFSVRVGKLLDFLVSERGIEANPEKINAIQQMKPPSSVHEVQ
KLTGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECKAAFDELKQYLQSPPALISPS
PGSELLLYLVASPVAVSAALVQETESGQKPVYFVSEALQGAKTRYIEMKKLAYALVMASR
KLKHYFQAHKVIVPSQYPLGEILRGKEVTGRLSKWAAELSPFDLHFVARSAIKSQVLADF
VAEWTLVLAPDPEPNDQFWVMCSDGSWSHKGAGVAAVLFSPNGVPIWYAARLQFDTTNNA
AEYEAVLTDSKLVVGHVDKSFEAKEEGMKRYLEAVRSMEKSFTGITVEHLPRDQNVEADA
LAKSAACGGPHSPGIFFEVLHAPSVPMDSSEVMTIDQEKLGEDLYDWRTPFVKHLETGWL
LVDEAEAKRLQLRATKYRMVSGQLYRSGVLQPLLRCISFAEGEEMAKEIHQGLCGAHQAA
RRVASKVFRQGVYWPTVLKVCVEQIKKCESCQRHGRSHAAPQYDLQPIAPIWPFARWGPD
IIGPFPLWNISLDGSKSNPLGAITSAAVQKFVWKNIVCRFGVPKEFITDNGKQFDSDKFR
EMCEGLNLEIRFASVAHPQSNGAAERTNSKILEALKKRLEGAAKGKWPEELLSVLWALRT
TPTRPTKFSPFMLLYGDEAMTPAELGANSPRVMFSGGKEGREVSLELLEGVRVEALEHLH
KYATSTSATYNKKVRPTELMPGHLVLRKKANPVAVGKLESKWEGPYTSSNTSPGWDLFA
Download sequence
Identical sequences LOC_Os08g22310.1|13108.m02287|protein LOC_Os08g22310.1|PACid:21890482 39947.LOC_Os08g22310.1

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