SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os08g34060.3|PACid:21886777 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os08g34060.3|PACid:21886777
Domain Number 1 Region: 230-398
Classification Level Classification E-value
Superfamily Bet v1-like 7.83e-29
Family STAR domain 0.024
Further Details:      
 
Weak hits

Sequence:  LOC_Os08g34060.3|PACid:21886777
Domain Number - Region: 50-156
Classification Level Classification E-value
Superfamily PH domain-like 0.0167
Family Pleckstrin-homology domain (PH domain) 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) LOC_Os08g34060.3|PACid:21886777
Sequence length 755
Sequence
MATITLKPPATAAAAGGEVSEVELSEAGSPDVGSQSSGSGGSGRSTAGSSGWVYHLGVNS
IGHEYRHLRFLVIRGKTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRRITSHGELYV
LRFYNRLDQTKKGEIACGDPGEARKWVEAFEQAKQQADYDLMTRGVSWNRSQNENELNLD
GHRPRVRRYAQGLGKLVRIGKGPEKLLRQSSNLQSHEIINTNFGGDSGDAFEAHEWRYVR
TFNGIRIFEDIANTKGGKGVLLKSVGVVGANPDTVFAVVLSSDKHKRYEWDMLTADLELV
ETIDGYYDVVYGTYEPRYLSWWKTKKDFVFSRQWFRGQDGAYTILQIPACHKNKPPRHGY
ERTKINSSTWELRRLNPPGSSTPKCLVTHMLEMSPSFWDRWKRRHNENFDRSIAFALLSQ
VAGLREYFAANPALTSDLPSTVVKPKQSDSLIIQSELEDSELNDEFYDALARGESFEDED
SDDDDDMIPKAGKVKFKNISWAIAASVEKSELVTNSTPVTIDSNHFHGTLRRAKSENDPN
SWSEPGGEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEA
AKKIPFILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIV
EGYWMVKRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSVARSIIGLVLGYVTGLVV
DLAILIEAKEEKELPEYILGTVRLNRANPDSAVPI
Download sequence
Identical sequences LOC_Os08g34060.3|13108.m03560|protein LOC_Os08g34060.3|PACid:21886777

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]