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Domain assignment for LOC_Os10g37620.1|PACid:21885852 from Oryza sativa v193

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os10g37620.1|PACid:21885852
Domain Number 1 Region: 381-537
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.67e-41
Family Retroviral integrase, catalytic domain 0.014
Further Details:      
 
Domain Number 2 Region: 103-234
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.08e-31
Family Reverse transcriptase 0.0046
Further Details:      
 
Domain Number 3 Region: 667-734
Classification Level Classification E-value
Superfamily Chromo domain-like 0.0000000066
Family Chromo domain 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOC_Os10g37620.1|PACid:21885852
Sequence length 760
Sequence
MGEVGEEREAGFENRIPAISGAGAGGRERGVGAGNAAHARRGRRGPEEAETWARRRLRAR
RGGGSGGRLGEDPTGFTLALHRYFLRASYKLNFRLGRRTSGCDTDATQLAFDQLKTAMSN
TPVLALPYFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIM
MVVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNI
VADALSRMPSSSQFCALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG
IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVK
QCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYA
NFIPLCHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMST
AYHPQIDGQTERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTSLGCSPHKALF
GVDPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQLRMKNKADKGRSDRVFAV
GDAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVS
QLKAQVPDHTPVYTSLPSPVVLDAADVVPEAILERRLVKRGNAAHVQVLLKWSLLPADHA
TWEDYHVVKTRFPDAPAWGQAETPAGGTVMTDNGDTEKEV
Download sequence
Identical sequences Q7XCP6
LOC_Os10g37620.1|13110.m03415|protein 39947.LOC_Os10g37620.1 LOC_Os10g37620.1|PACid:21885852

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