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Domain assignment for LOC_Os12g21580.1|PACid:21936978 from Oryza sativa v193

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os12g21580.1|PACid:21936978
Domain Number 1 Region: 451-537
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.78e-21
Family Reverse transcriptase 0.0039
Further Details:      
 
Domain Number 2 Region: 292-398
Classification Level Classification E-value
Superfamily Acid proteases 1.58e-16
Family Retroviral protease (retropepsin) 0.045
Further Details:      
 
Domain Number 3 Region: 240-277
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000000767
Family Retrovirus zinc finger-like domains 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOC_Os12g21580.1|PACid:21936978
Sequence length 567
Sequence
MAAVQQVRAATVKNAPTVGIPTAPPAMCNDQEKVAFATHQLQGPASAWWDNHMATRPPGT
EVTWAEFCCSFRKAQVPDGVMAQKKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDA
LKQEKLLAGLDDERTNQLISRDYADFEKLVEKAIRQEDRRNKMDRKRKTAQFRSNPRSHQ
RPRFTSGQQGGPTIMIVHQHRPFNSSGFHQGASGSQNHQGGQPNCNAAPHPPMAPAQSAP
SAQAKKETGAKPGSCFNCGEHGHFADKCPKPTRAGPRFAQARVNHASAEEAQAAPEVILG
TFPVNTIPATVLFDSGATHSFISKKFAGVHGLRKEELSTPMRVHTPGNSSTSVSYSPSVL
IEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVIDCVNRTITLTNEKGEAVVYKSPVS
LKQGISLNLIEVKNPVATEEKSSRKLEDIPIVCEYPEVFPEDLTTMPPKREIEFRIDLAP
GTAPIYKRPYRMAANELVEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKDNTKRMCCHAQ
KFTSNFQTNLCIKTLVQESTEVHKLII
Download sequence
Identical sequences Q2QT77
LOC_Os12g21580.1|PACid:21936978 LOC_Os12g21580.1|13112.m02187|protein 39947.LOC_Os12g21580.1

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