SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for GSADVT00027001001 from Adineta vaga

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GSADVT00027001001
Domain Number 1 Region: 239-276
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000471
Family LDL receptor-like module 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSADVT00027001001
Sequence length 1895
Comment pep supercontig:AMS_PRJEB1171_v1:HG380866:11450:17137:-1 gene:GSADVG00027001001 transcript:GSADVT00027001001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNTIFLIQGKRIFQIFLLFSFWLILMTCQLNMYNLIEETNDKSNALEYDCLDYYVYRAKL
AYQHLYDITVDVIPFCFRPMHRLADDPMDSSVHPLARQLSFETISLTGITSQQLLSWSIS
MKIAERYQAYLNTKGIESLNEYFYNCTPPWFGVRCQYSFEPRYTNISSFNEIIEATFQQK
QPYSPSSNTMMPVSMPCYDLVECHQNGRKWCLDWREICNGVVDCFDEGIDEENCFVIEMN
VCRDDEYRCHNGMCIPEDLWNDGDGEADCVDRSDEKLDVSYVKMCYQDASFRCEEHSCRA
DGGTFSCGDGECVTKYEYCHSGRDQLLIESIMRQDDLDDECWMTMVCLSGVVKQINGTSC
HQWLMNDVANEYLTQCPLFFQFPSVAVYSNHVRFFYENVHLRSDLEMNLFPNYICYDAEL
CEFRSFERVRGNLSCLIELDNDIEWDKAYPWSALILWIEQKFRSCLVSKSFFPISTKLIE
YPVLYHCNNSRKMISTLRIMDKIIDCIDIDDETFSNSCSLNHQHREKCDNTGECLSPIGK
KHACLFSRAQSKEEIPFQKFCDGITHYFYYNLNRQIRTDEDGCEMNKVCDNIYARCDGYW
ACSDGRDESNCSQSLCPPKHHPCISPDNYTMFCLPHTLVNDGRDDCLGATDEQTECRERY
YSNEISDNFRCLNDSSCLKSSELCDKTTHCPLLNDDEAFCQDSQFTFTCEQNGSYHRNEI
EQILCGLNEYDKYRYRFFTLITSPIYPSSISSHLTNEINYHLQAQEEEEEEEEEEFMIKK
NTTMIEEDNQWTHDCNRGIKIEKYTNNGTFSNCLCPPSYYGDLCEYQNQRLSLSLQLSSI
NRYETYGIVILLIDNDEIIIEFNQLQYIAKDSCTMKFNQYLLYPTRPKNLSTNYSIRIDV
IEKNWMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXFVFVQCIV
Download sequence
Identical sequences GSADVT00027001001

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