SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00058849001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00058849001
Domain Number 1 Region: 99-144
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000537
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 2 Region: 156-194
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000589
Family LDL receptor-like module 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GSADVT00058849001
Sequence length 475
Comment pep supercontig:AMS_PRJEB1171_v1:HG381271:111400:113056:-1 gene:GSADVG00058849001 transcript:GSADVT00058849001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNHCVRLVLLFTPSLAALGLLGIAFATNWWTIALERNIPKDNSFNSSNDERIQSILIRVP
HSRSLFSECVAYRNVKVLVSNTFDFRPSFTSDELFKLENENCTTEQVQCKEGVAIARPLT
RCIDKQRKCNRIVDCEDKSDETNCSDTTGIHDQEFFHCPTNYMKCQDKKSCYRPSEQTCD
GVSNCIDDSDEMNCNAEKCQQNKHTYCPRDGKCARRDHSKRCDGIVDCADHSDEDDCQRC
NGDSSMISCDSKCFPSEYMCDGIVHCSNFQDEINCDAYPTTSERHKKFSYNGQTCMEQRF
NPLRFHPFTIDKSTLKSYKHPEQRIDYLNLIFYSRLIIFYGIVGGLIFLLFAVLSLFFFG
CCRRHCVSVPFYFYGLWMLLAWLLIMIALVTFAYMWFWQKQTVLDEGKSLLNEIMIHERN
PTLRRVEFFGLSFWLACGAALSTLIGLLLSYCVCCTLGSSRADDKEYEIMHMHAY
Download sequence
Identical sequences GSADVT00058849001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]