SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00062398001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00062398001
Domain Number 1 Region: 826-869
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000206
Family EGF-type module 0.0092
Further Details:      
 
Domain Number 2 Region: 68-103
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000257
Family LDL receptor-like module 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSADVT00062398001
Sequence length 1139
Comment pep supercontig:AMS_PRJEB1171_v1:HG381381:49517:53140:1 gene:GSADVG00062398001 transcript:GSADVT00062398001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTFNDIVYETFNQRSDESFTTGTCYRFIDNCNDELWPMCLDWREICDQKLDCPNGEDERF
CEELESNECNKNEYRCHNGQCIPLEFAWESPTSVDCLDGSDESIERDGYTNIFHSEPLDF
NYNCTSLPIFACEERTARYPRQFVYTEINRQLFTSLNHIKDENCRNAFYCLVNSFENIFP
SESTFVEDCESLQDKCSSEWLVLPKKPVMFGFFQFIYFTNRSVDEFKENILPDLTCFDIK
KCPSLTNVIINITLINGLTCTPTSIFTFYDQTSNLFQLILSFNKIIEECLTKGIDISCNN
STHFHCDLSLRCISYHRVQDGYLDCSFNEDESFSACSWNDSSRYQCSKENYSCLSPVAIS
NSVPDCKNGEDEEIYHKQDFDETTPYSKFCLGLAQQYIFDDTYNDLLHCKLWPCDSPYVH
CDQIWDCPNGVDELNCPDTNCSSNAHECYDSSLRSTYCLSAAQIVDEIKSDCDRLSNRQL
YYINGNTINENEYYLWNKTKCLYANNICLSASLPLTTGDDDVCVYERKIPKMKNRQSVMI
LGTERQLCHLKIDTMQKRKESFLNAFRLGSFPEVTSLLSVKYISRINEEKTLQSSININI
SQTLFCHRGILILSGNNQTKTCLCPPSYFGSQCQWQNQRISLTFKLIPPQTTFISAIFQI
IIMLIGRQGNKTDQYEQIVYSPSRDCRTKFHLYLLYPQRTKSHLNNYSIHIDLFNKMTLK
HWTSWFIPIPFQFLPVNRISTKLIIPNERLKRPCPLLCGLHGQCMQYTNNQSKYFCLCDQ
NYSGSFCNESYQCQCSEDSFCLTSNICICPLDRFGSKCYLKRSICSLTNNPCKNDGICIP
TDDRINLHGYYCFCKENYFGLHCEVNSYRVSVKLDEAITRNSSFVFIHFITIFQHAKHER
TTILKKIPIDSDTIIFYTSKQFNIAFVQLVNQSYYLLIVRETFLLLENIHGKVLSKQTCP
YVKHFLNSTILNYETIHHPKYYPFVCRQYLHLMCFYDETLMCVCDLDRFANCFAFNHTLD
NTCEGHNDCQNDGQCFQNNQTCPTMSICACKDCYYGGKCQMSNEGNLLSLDPIIGYYIKP
NVAFYYQPLIIKVTMSITLAIFILDLIDVLLSILTFHMENPRQVGCGYYLYHHQFFHYL
Download sequence
Identical sequences GSADVT00062398001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]