SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00040689001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00040689001
Domain Number 1 Region: 260-290,317-524
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 5.89e-51
Family Voltage-gated potassium channels 0.0012
Further Details:      
 
Domain Number 2 Region: 116-207
Classification Level Classification E-value
Superfamily POZ domain 4.71e-22
Family Tetramerization domain of potassium channels 0.0000708
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSADVT00040689001
Sequence length 649
Comment pep supercontig:AMS_PRJEB1171_v1:HG380978:101560:104085:1 gene:GSADVG00040689001 transcript:GSADVT00040689001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDYEKLGNGELYKTTLLSDAVPSLSSSTAIGNVISNPIDECQISPFFSSTTRDSGCYSST
PAEEWHLMQPHLSMANHHQNKQKEQQQQQQQEGQSLSHSTYPTLSRRSSESEPFDKVIIN
ISGLRFEARASTLQRFPCTLLGDKQRRAEFFDYMNNEYFFERHRSSFEAILYFYQSGGRL
TRPENISAEIFLEEIKFFDLEKIKLNYVKIRREKIHFLKIMSDEILKRYRKQEGYVEEIP
IERPANTFQRKVWEAFECPESSNIARVIAIVSIVMIVVSIASFIIETLPSIRNEMTAPTI
LVPSNTSETGHEIRHGGETKCFWLFFAIETVCVTWFCFELVCRFLVAPSKFAFIKNGPNV
IDVVSIIPYFLQLIGLIYQKKDSGVSGFSSTLTVLRIVRLVRVFRIFKLSRHFKGLQVLA
LTFLASWKELLLLMFFLFIIVVVFHHLCIFLSNLDTNQQSSSQNANQFSSIPHSFWFSII
TMTTVGYGDYVPRTNLGKVIGAMCALTGVLTIALPVPIIVSNFTYFYQRQMEDNERQYQA
IQRAHAKQFNQDKNQLGINNDKDHGPEYNEWETILNEPDYSDYREITHAVTKRLVRNAYF
KAFRGSKTISPTMRYQTLAPTSPTYRIYQTVDDDYRTQESDLEKVSLLH
Download sequence
Identical sequences GSADVT00040689001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]