SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G17270.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI1G17270.1
Domain Number 1 Region: 57-357
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 9.05e-77
Family Protein kinases, catalytic subunit 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G17270.1   Gene: BRADI1G17270   Transcript: BRADI1G17270.1
Sequence length 402
Comment pep:novel chromosome:Brachy1.0:1:13828207:13829629:-1 gene:BRADI1G17270 transcript:BRADI1G17270.1
Sequence
MGNCCCIKGSAKCANASTPFESKVVSKSGGGGGASNNNNFSSKSKAAAAAEVPPAAPPAS
SLKSFSMGDLRAATKNFGSSSYLGEGGFGCVYKGWIDEATFAPTKPGAASGRMVAIKKLK
KESFQGHKEWLAEVTYLGQLHHENLVKLVGYCSDSDSNKLLVYEYMLRGSLENHLFRRGT
HPLTWASRIAVAADVARGLAFLHARDVIFRDLKSSNVLLDGAHRAKLSDFGLARAGPTAG
RSHVSTRVVGTRGYAAPEYVATGHLSAKSDVYGFGVLLLELMTGRRALDESRGPAAELLV
DWARPFLTGERRRKQQVMRVMDTRLGGQYPKRQAQEMAELAMRCLQNDPKNRPTMADDVL
PCLLLLQQANTKSSSLATTTMEVPSPRLVSSTTPVHRRHRKI
Download sequence
Identical sequences I1GR01
15368.BRADI1G17270.1 XP_014752640.1.954 EG:BRADI1G17270.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]