SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bathy01g01240 from Bathycoccus prasinos

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bathy01g01240
Domain Number 1 Region: 1403-1642
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 5.57e-23
Family Voltage-gated potassium channels 0.02
Further Details:      
 
Domain Number 2 Region: 588-698,734-857
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 1.18e-16
Family Voltage-gated potassium channels 0.02
Further Details:      
 
Domain Number 3 Region: 110-283,393-459
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.00000000000000683
Family Voltage-gated potassium channels 0.02
Further Details:      
 
Domain Number 4 Region: 1083-1240,1282-1352
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.000000000000149
Family Voltage-gated potassium channels 0.021
Further Details:      
 
Weak hits

Sequence:  Bathy01g01240
Domain Number - Region: 1655-1697
Classification Level Classification E-value
Superfamily EF-hand 0.00391
Family Calmodulin-like 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Bathy01g01240
Sequence length 1807
Comment chrom=[bathy_chrom_01] coords=[;227989..233412;] status=[complete sequence]
Sequence
MTTTTTCVVRKGERARDLDFFVGEEGGRSKEEEEEETTTTTTTSPPQTQTQTPTPPLCKF
REAVVKVLSTITAEPRPLRSKFGTTAVCISKDSKRRKVFKAVFSRTFEYLLFSIVFAHFA
VLAVLLAKNDGENDDGNYASGGFQTLIRKPLWAVDFAILIFYTCEMALKMYALGVFGSRH
AYLTSNAYNRLDCFIVTVSWMSVMSECYDFTPDVFPALPRLRLGHLRVFRATLALRSFSF
ASSVIVIMEALSASIPLLRDVIGVSCVCFVFYALMGVSTFGGSFRRRCVIADSKEAARVG
TYNDTTPFFCGDVENTIDGKGFVCPGAYFLDTTYRGESVEDALAFEQLYASPVLNETLVS
NALGLSYSSTFIEHELTFKNMFCSDKVGNPRFGKQSFDDFFAALTSMFTCITLEEWPETM
YVTVNSEFRASAAYYITLIIVGTYFIVSVFVAAVSGVFLRLRREHVAVLKHRNARERTSS
STNEEEEEEFVKGFARFTRLKNALRFFKHHHEGGEKKDTFVDIAAIALERNKSERGRLSA
YTNSDDDDECALSSPNDIEEGRKLPMRKIKSGVARNKRDRVNEIVSNPTFDLVSRILIVL
NTCSMCAYKSYQPDTTKRFLDGLDYYFLAVFYCECGLRLFAAKGILGRIFSLKQSLKPGE
LSLIWDFLVLSATAAGADHKGPNLVALRVVRLFDHPSAGIEKNSGKSTKVSSTTNGEEHS
STTTRSSSGGENDTLARVFRSFGTMLSLLCFYGVVLAAYALLGMQLFPKYATDALKKRDD
DANIDNVTVPYPRENFETYPNALLAIFTVSTGEGWVAMLYHFRRVTWLATPYFVSFFVLV
NYVVLNLIIAVILENLELRDFEKNNMQRREIVKREVERRMRSGAFVDRLEKIRVWFVLKK
RVRFWNIDEEHEISPWLASRARRALRISVAIESVISERNSKKIFAGKRSRAQKLTTGSAT
LLRQQQQHERFKQIQPIKRMNAIRRRSVFDTRVNTPNEEPKDTERLRLQSSSFSLLEQGK
KAAMKENMNTYLYEEDEEYFDIFHEEEHFHALPAYFTNKSLGAIPLENKLRQMLQRWLSK
KWYERISYLFVVVSIAAVLGADPVTEVNPHQFFLDAANALVAGYFLLDFLIKIVSDGLIF
TPTAYFSSMWNILDTLVLCVDVVIVAGPIVFSSIWNWYFQRAINVLVSLRMFRVLSRNTK
MQRLVVSVTQTLPSIGSVIKLTFAIFLAFAIVGVRIFGGKFGFCEQILGVTQSVSSSTYV
TKRLDIDQYSCDLREDTYWNSPKYDFDWIGSALLTLFETASLDGWIDIMHHAMDIGGNKN
ANWPACLFFITFILCGSFMMIRTIIGVFIDRFGISSGLKLLTERQKLWRDMHGVAMSIKP
MRVEMKPVVGSVRRKCYDAIHSKMFKKVILFLLSLNIVLLATVHFDADASWEYAWNIGDV
AFVSIYLLESLVRLFVALPHPLYFFKDPWNCFELFLSCGSAATLFPTNPSGVRAQIGRPF
RFLRTFRILRHATDLRRVSRTMILAVPSILSVIGVMLIWMFLYAAVGTQVFFNVKYGESL
NKDANFSSFVNSFLLLFQVLTGEGWRQFMYDLQIDEPHCSKNHAGDNIDNCGFGNGATFY
FVTYVVAMGYIFTNLFVATILDHVTFGVLRESSLVSTKNLEDFQTIWSTFDPNATGFIGL
HQIWPFLKRLPEPLSKITAEGEGNDLEKEKEKKFKTDALRLRYLSTISKWRRRIFAELHY
VRHPNKGVPFSECLDALLHAKLGNSALTLDTRLRREKELEHIDKLGACVYIQRVFRGHRV
RRKKERS
Download sequence
Identical sequences K8EYZ0
Bathy01g01240 XP_007515549.1.44737

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]