SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bathy01g03990 from Bathycoccus prasinos

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bathy01g03990
Domain Number 1 Region: 613-649
Classification Level Classification E-value
Superfamily EF-hand 0.0000000226
Family Calmodulin-like 0.003
Further Details:      
 
Weak hits

Sequence:  Bathy01g03990
Domain Number - Region: 523-565
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.000898
Family Rad21/Rec8-like 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Bathy01g03990
Sequence length 650
Comment chrom=[bathy_chrom_01] coords=[;739765..741566,741947..742097;] status=[complete sequence]
Sequence
MGNSGLDDDDLLDYDMNMLLDRDDPRRGNDENLDTMSNMSEFNAAPSGSKAVSGGENRFY
LRDEEVLQWAKNAGDSDDDKAASKRKSDKRLQLEKSRRAKLDLDDDDMMFRLGYGGLMDD
DDLSGDEEARERKRQRAFGMEEEDDEQNILAPIPDEGSEDEDHQGFVAMPMDASEEEKAF
LEPAFQSQKEQDQREERLLLDLRAANAPVRPRQKRPKVARLANQRAIIFDHQTRIENDEY
KQWLVNCDDIVCDRPRKEIPIDEKDIHLMNDEKALAAHFRATAFRTGRESFFRKGDRWKK
FEAMLYPNYKSKVNFAPIPGDATLVPPPEVKRPDGEYTTEDEDNGYNVPPAWDEEEEEHF
LKFDASKRAEKRAALVRTPSSGGGVSASLRSTRGGSVVRTPSSLADALEGKELEFVDEHG
QSHGNLHEDTIHEDREMLVRTFSQKSNEPLDKSQPLKETEEEPAGYLDCSGRHRHERIPR
AAKNLLVFLSANTVWNQDDTNTSEAAFDAASTEGKEKEKASASIDLTELCESNALTRQAA
ARCFYNVLILQSEAFVDAKQEHIVNDDEEENEASFAFEDIPPVVLSKGDRYREGLAASLA
TTHTTQKNNSNKNIMAAELTDEQITEFKEAFALFDKDGDGTITTKELGTF
Download sequence
Identical sequences K8ENP9
Bathy01g03990 XP_007515181.1.44737

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]