SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bm1_52245 from Brugia malayi v1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bm1_52245
Domain Number 1 Region: 264-370
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 1.57e-21
Family Voltage-gated potassium channels 0.0034
Further Details:      
 
Domain Number 2 Region: 418-583
Classification Level Classification E-value
Superfamily Fibronectin type III 8.82e-20
Family Fibronectin type III 0.0027
Further Details:      
 
Domain Number 3 Region: 49-81,151-219
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.00000000000131
Family Voltage-gated potassium channels 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Bm1_52245
Sequence length 584
Comment | Brugia malayi Twik (KCNK-like) family of potassium channels,
Sequence
alphasubunitXXXXXXaaXMCVGTGSGLCRLNELTSAQLGFTRQMVHHTALPHITLLL
AAICYIIVGSLSFTAFCYIDDHTEIDGSLLAEMKENLIAETIRPRPMSERKANLEKSMDN
YASKLHKIFQKYIRQSFMRKPTIIERLHEKEHVTSKLMWNLFFAATALTSIGYGSNVSDS
HFARLFIIVYLFIGIPLFLITLTDLAKFFTEFINRSYAEVLKYKVITSRKLKSRFEVPVD
EIIVSGGEDEVAEFLWAHLENAHFVEVPFVVIYILLFAYVIAASYLISWIEGWNIYDGLY
FIIVSMLTIGFGDLVPRNQSFILLTLLIVLFGLILATSFIDVVGTYYIDRLHFFGRNFDL
EHDSLEWLKKVKQQRLIAMKREAMRKLFETVAALQHMEIDFRLQQNRTDMRNALLMSPPY
PPRNLRAIDSTADSVVLTWDPPTHNHEGKCFWYTIAYQIRTPRTRNSPATVIEFISDEHY
VVTGLRSFTLYVFSVATTTTFGSSKPIRCYEYTEPCTVPQSLSLEALSCETATFVWDAPH
KNIAPESYVLLLSQDPAPQFPSWQSYDCGNNKCFTVTELLPNTR
Download sequence
Identical sequences Bm1_52245

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]