SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bra015972 from Brassica rapa Chiifu-401 1.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bra015972
Domain Number 1 Region: 76-240
Classification Level Classification E-value
Superfamily TPR-like 0.00000645
Family Tetratricopeptide repeat (TPR) 0.048
Further Details:      
 
Weak hits

Sequence:  Bra015972
Domain Number - Region: 191-385
Classification Level Classification E-value
Superfamily HCP-like 0.000314
Family HCP-like 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Bra015972
Sequence length 483
Sequence
MNDVLVYNVMIKAYGMAKLHEKALSLFKGMKNQGTWPDECTYNSLVQMLSGSDLVDEAQR
VLSEMVDSGCKPGCKTFSSLIASYVRLGLLSEAVDVYEEMRKAGVKPNEVVYGSLINGFA
ESGMVEEAIQYFKTMEEDGVKSNQIVLTSLIKAYSKVGCLEEARRVYDRMKKDTEGGPDV
AASNSMLSLCAELGMVSEAETIFNDLREKGTCDVITFATMMYLYKGMGMLDEAIEVAEEM
RESGLLNDCVSFNQVMACYAADGQLRECCELFREMLVERKLSLDWGTFKTVFTLLKKGGV
PREAVEQLQAAYNEGKPLATSAITATLFSAMGLYAYAMDSCKEITRDEIPLEHYAYNAVI
YAYGASGEVDMALKTYMRMQEKGLKPDIVTQAYLVGVYGKAGMVEGVKRVHGWITFGELE
ANQSLFRAVRDAYVSANRRDLADVVKKEMSIAFEDGQEEEFSSISGEEEEEDDDDESEED
EAF
Download sequence
Identical sequences M4DHJ5
Bra015972

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]