SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bra037699 from Brassica rapa Chiifu-401 1.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bra037699
Domain Number 1 Region: 64-260
Classification Level Classification E-value
Superfamily Lysozyme-like 4.22e-64
Family Family 19 glycosidase 0.0000233
Further Details:      
 
Domain Number 2 Region: 25-61
Classification Level Classification E-value
Superfamily Plant lectins/antimicrobial peptides 0.0000000314
Family Hevein-like agglutinin (lectin) domain 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Bra037699
Sequence length 260
Sequence
MALTKISSVFLICLFGFYSQTAKSQFCGCSPILCCSQHGYCDITDQHCGSGCQSGPCRTS
REPVEKIVTQKFFDGIINQSRNGCAGKRFYTRESFLSAANTTLNFNSIVTRLEIAAMFAH
FTHETEHFCYIEEVNGTSRDYCDENNMQYPCVPGKGYYGRGPIQLSSNFMYGECGDTLKL
PLLSQPELVGSNSTVSFRTGLWFWMKSLRPVLKEGFGATIRAINGKECDGGNSGAVSART
GNYRDYCRQLGVDPGANINC
Download sequence
Identical sequences A0A078GY33 M4F9D6
XP_009142208.1.100322 Bra037699

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]