SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bra003030 from Brassica rapa Chiifu-401 1.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bra003030
Domain Number 1 Region: 514-776
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.43e-70
Family Protein kinases, catalytic subunit 0.00027
Further Details:      
 
Domain Number 2 Region: 82-192
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.57e-26
Family alpha-D-mannose-specific plant lectins 0.0037
Further Details:      
 
Weak hits

Sequence:  Bra003030
Domain Number - Region: 380-430
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.00169
Family Hairpin loop containing domain 0.085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Bra003030
Sequence length 804
Sequence
MVLLLNTRRRFVIVLLLATLSCFSVRLCFGQDRITFTSPINDTDSLLSQSGVFRFGFFTP
VNSTTRIRYVGIWYDKIPKPTVVWVANKDTPINDASGVVSISEDGNLVVTDGRNRLLWST
NVTVPPVAPNAAWVQLMDTGNLALQDNQNNGEILWESFKHPYNSFLPTMTLGTNKRTGEN
LKLTSWRSYQDPSTGNYTAGLAPLTFPELTFPELLIWKNNVPVWRSGPWNGQVFIGLPDV
DSLLFLDGFNLINDNQGTFSMSFANDSFMYHFNLDPDGVIYQRDWSTSLRDWRIGAMFPS
TYCDAYGICGPNGSCSSREDPPCECVKGFVPTNSTEWNARNWSNGCVRKGQLRCERQSNG
GGKGDVFVRLQKMKVPVNAVQSDANEQDCPKQCKDNCSCTAYAFDRGIGCMLWSGNLVDM
QSSLRTGIDLYIRLPHSELKTHSNRAVIIIAPVLGVAFLAAVCVLLACRKFKKRPDTSAE
LMFKRMEALTSGNETASNQVKLKELPLFEFQGKLSEGQEVAVKRLSQASGQGLEELMNEV
VVISKLQHRNLVKLLGCCIEGEERLLVYEYMPNKSLDAYLFDPLKQKILDWKTRFNIMEG
ICRGLLYLHRDSRLKIIHRDLKVSNILLDDNLNPKISDFGLARVFRANEDEANTRRVVGT
YGYMSPEYAMEGLISEKSDVFSLGVIFLEILSGRKNSHKEENNLNLLAYAWKLWNEGEAA
SLADPTIFDKSFEKEITRCVQIGLLCAQEAANDRPNVSTVIWMLTTENTNLQEPKQRALI
ARRGSCDQGSLSTNDLSLTAVTGR
Download sequence
Identical sequences M4CFP8
Bra003030

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]