SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000027191 from Callithrix jacchus 69_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000027191
Domain Number 1 Region: 359-445
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 5.41e-18
Family Eukaryotic type KH-domain (KH-domain type I) 0.0011
Further Details:      
 
Domain Number 2 Region: 135-212
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.75e-16
Family Eukaryotic type KH-domain (KH-domain type I) 0.0018
Further Details:      
 
Domain Number 3 Region: 216-298
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 2.05e-16
Family Eukaryotic type KH-domain (KH-domain type I) 0.0012
Further Details:      
 
Domain Number 4 Region: 448-528
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 2.92e-16
Family Eukaryotic type KH-domain (KH-domain type I) 0.0017
Further Details:      
 
Domain Number 5 Region: 16-124
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000000363
Family Canonical RBD 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000027191   Gene: ENSCJAG00000014731   Transcript: ENSCJAT00000028745
Sequence length 542
Comment pep:novel chromosome:C_jacchus3.2.1:15:7258640:7438679:-1 gene:ENSCJAG00000014731 transcript:ENSCJAT00000028745 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
IFSCPGHYHVGGFLNPGSRKIQIRNIPPHLQWEVLDGLLAQYGTVENVEQVFVFSLVNTD
TETAVVNVTYATREEAKIAMEKLSGHQFENYSFKISYIPDEEVSSPSPPQRAQRGDHSSR
EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGA
AEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNL
KKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACACAEIEIMKKLREAFENDMLAVN
QQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPHHQFGP
FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI
ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN
LTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKHQEQKYPQGVASQR
SK
Download sequence
Identical sequences F7H5B4
ENSCJAP00000027191 ENSCJAP00000027171

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]