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Domain assignment for ENSCJAP00000000360 from Callithrix jacchus 69_3.2.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000000360
Domain Number 1 Region: 36-129
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 7.32e-36
Family SCAN domain 0.00000402
Further Details:      
 
Domain Number 2 Region: 634-690
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.89e-24
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 3 Region: 364-421
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.69e-23
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 4 Region: 522-578
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.81e-22
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 5 Region: 577-634
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.95e-22
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 6 Region: 406-458
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.88e-17
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 7 Region: 679-731
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.6e-17
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 8 Region: 484-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000118
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000000360   Gene: ENSCJAG00000000218   Transcript: ENSCJAT00000000392
Sequence length 734
Comment pep:known chromosome:C_jacchus3.2.1:22:49083958:49094945:-1 gene:ENSCJAG00000000218 transcript:ENSCJAT00000000392 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRPAVLGSPDRAPPEDEGPVMVKLEDSEEEGDAAPWDPGPEAARLRFRCFRYEEATGPQE
ALAQLRELCRQWLQPEVHSKEQMLELLVLEQFLGALPPEIQARVQGQQPGSPEEAAALVD
GLCQEPGGPRRWVTVQVQGQEVLSEKMEPSSFQSLPQTQPQTPESEPETPPGTMQGSSLS
LQVKEEPEVTEDSDFLESGPLAATQESVPTLLPDEAQGCGTVLDQAFPHTKTGPEGPSWR
EHPRALWHEEAGGIFSPGFALQLDSISSGPGSVSPHLHIPWDLGMAGLSGQIQSPSCEGG
FAHALVLPSDLRGEQDPTDEDPCRGVGPALVTTRWRAPRGRSRGRPSTGGGAVRGGRCDV
CGKVFSQRSNLLRHQKIHTGERPFVCSECGRSFSRSSHLLRHQLTHTEERPFVCGDCGQG
FVRSARLEEHRRVHTGEQPFRCAECGQSFRQRSNLLQHQRIHGDPPGPGATPPAPPGVPE
PPGPFPCSECRESFARRAVLLEHQAVHTGDKSFGCVECGERFGRRSVLLQHRRVHSGERP
FACAECGQSFRQRSNLTQHRRIHTGERPFACAECGKAFRQRPTLTQHLRVHTGEKPFACP
ECGQRFSQRLKLTRHQRTHTGEKPYHCGECGLGFTQVSRLTEHQRIHTGERPFVCPECGQ
SFRQHANLTQHRRIHTGERPYTCPECGKAFRQRPTLTQHLRTHRREKPFACQECGRRFHQ
STKLIQHQRVHSTE
Download sequence
Identical sequences F7HIW5
ENSCJAP00000000360 ENSCJAP00000000360 XP_008987106.1.60252

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