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Domain assignment for ENSCJAP00000034579 from Callithrix jacchus 69_3.2.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000034579
Domain Number 1 Region: 40-132
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.24e-39
Family SCAN domain 0.0000391
Further Details:      
 
Domain Number 2 Region: 506-563
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.08e-25
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 3 Region: 283-340
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.64e-24
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 4 Region: 454-507
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.05e-23
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 5 Region: 339-394
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.24e-20
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 6 Region: 548-600
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.35e-20
Family Classic zinc finger, C2H2 0.0083
Further Details:      
 
Domain Number 7 Region: 398-452
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.75e-19
Family Classic zinc finger, C2H2 0.009
Further Details:      
 
Domain Number 8 Region: 247-297
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000272
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000034579   Gene: ENSCJAG00000018619   Transcript: ENSCJAT00000036518
Sequence length 613
Comment pep:known chromosome:C_jacchus3.2.1:4:624252:644384:1 gene:ENSCJAG00000018619 transcript:ENSCJAT00000036518 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASTWAIQAHMDQDEPLEVKIEEEEKYTTRRDWNLHKNSSHSREVFRQYFRQLCYQETSG
PREALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQGQHPESGEDVVT
VLEDLERELDEPGDRVLPHTKEQEMFLQEMVSLGKEGETSMSLQSMKAQLKYESPELEFQ
QKQALDIETGNECGNLKQEVSEEMEPHESTPSKSEHAMSQSVRCRETYEPEEITEEPSAH
SREVKQPTCDENGVSLTENLDRTEHQRICPGEKSYGCDDCGKAFRQHSHLIEHQRIHTGD
RPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKVFGRWSALNQHQRLHTGEKHYH
CNECGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSISRRSILTQHQGVHTGAKPYECNKC
GKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGGKPYKCEVCEKAFI
QRTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITS
LIQHQRIHTGEKPYQCDECGKAFRQRSDLSKHQRIHNRGGPYICKECGKSFRQNSALTQH
QTIHKGEKAVSVR
Download sequence
Identical sequences F7D7J4
ENSCJAP00000034579 ENSCJAP00000048432 XP_017826299.1.60252 XP_017826300.1.60252 XP_017826301.1.60252

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