SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000004319 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSCJAP00000004319
Domain Number - Region: 117-322
Classification Level Classification E-value
Superfamily Tropomyosin 0.085
Family Tropomyosin 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000004319   Gene: ENSCJAG00000002387   Transcript: ENSCJAT00000004553
Sequence length 377
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:9:88712311:88726372:-1 gene:ENSCJAG00000002387 transcript:ENSCJAT00000004553 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSEVKSRKKSGPKGAPAAEPGKRSEDGKSPEAPGGGGGGWADPRTGLSLLSLGTCLGLAW
FVFQQSEQFAKVENQYQLLKLEANEFQGLQSKISLISEKLETTESILQEATSSMSLMTQF
EQEVSNLQDIMHDIQNNEEVLTQRIQSLNEKFQNITDFWKRSLEEMNANTDIFKSEAKHT
HSQVTVQINSAEQEIKLLTERLKDLEDSTLRNIRTVKRQEEEDLLRVEEQLGSDTKTVEK
LEEEQHALFARDEDLTNKLSDYEPKVEECKTHLPTIESAIHSVLRVSQDLIGTEKKMEDL
TMQMFNMEDDMLKAVSEIMEMQKILEGIQYDNSILKMQNELDVLKERVHDFIAYSSTGEK
GTLKEYNLENKGIGGDF
Download sequence
Identical sequences F7CL44
ENSCJAP00000004325 XP_009002664.1.60252 ENSCJAP00000004319

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]