SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000005785 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000005785
Domain Number 1 Region: 514-543,641-720
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.00000000000128
Family Anti-sigma factor antagonist SpoIIaa 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000005785   Gene: ENSCJAG00000003142   Transcript: ENSCJAT00000006093
Sequence length 737
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:15:24315244:24324083:-1 gene:ENSCJAG00000003142 transcript:ENSCJAT00000006093 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELRKQDYHMERPLLNQEHLEELGHWGSAPRTRQWRTWLQCSRARAHALLLQRLPILVWL
PRYPVRDWLLGDLLSGLSVAIMQLPQGLAYALLAGLPPVFGLYSSFYPVFIYFLFGTSRH
ISVGTFAVMSVMVGSVTESLAPQALNDSTINETARDAARVQVASTLSVLVGLFQVGLGLV
HFGFVVTYLSEPLVRGYTTAAAVQVFVSQLKYVFELHLSSHSGPLSLIYTVLEVCWKLPD
SKVGTMVTAAVAGVVLVLVKLLNDKLQQQLPMPIPGELLTLIGATSISYGMDLKHRFKVS
VVGNIPTGLVSPVAPNAQLFSKLMGSAFTIALVGFAIAISLGKIFALRHSYRVDSNQELV
ALGLSNLIGGIFRCFPVSCSMSRSLVQESTGGNSQVAGAVSSFFILLIIVKLGELFHDLP
KAVLAAIVIVNLKGMLRQLSDICSLWKANRADLLIWLVTFIATILLNLDLGLVAAVIFSL
LLVVVRTQRPHYSILGQVPDTDIYRDVAEYSEAKEVPGVKVFRSSATVYFANAEFYSDAL
KQRCGVDVDLLISQKKKLLKKQEQLKLKQLQKEKKLQKQATSSKDTSVSINVNTSLEDMS
NNVEDCKVMQVSPGDKMEDATASGQEDSKAPDVSTLKALGLPQPDFHSLILDLSALSFVD
TVCLKSLKNIFRDFREIEVEVYMAACHSPVVSQLEAGHFFDASVTKKHLFASVHDAVTFA
LQHPRPVTDSPVSVTRL
Download sequence
Identical sequences F7I7J0
ENSCJAP00000005785

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]