SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000007785 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSCJAP00000007785
Domain Number - Region: 178-202
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0034
Family CCCH zinc finger 0.0032
Further Details:      
 
Domain Number - Region: 13-41
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00916
Family CCCH zinc finger 0.0036
Further Details:      
 
Domain Number - Region: 213-236
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0471
Family CCCH zinc finger 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000007785   Gene: ENSCJAG00000004294   Transcript: ENSCJAT00000008231
Sequence length 381
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:1:12325442:12474113:1 gene:ENSCJAG00000004294 transcript:ENSCJAT00000008231 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP
AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE
VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL
QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH
YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT
ANQVLNNSYDHLTSVLGSAKL
Download sequence
Identical sequences F6WXC0
ENSCJAP00000007802 ENSCJAP00000007785

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]