SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000009059 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000009059
Domain Number 1 Region: 388-576,631-931
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.18e-65
Family Tandem AAA-ATPase domain 0.02
Further Details:      
 
Domain Number 2 Region: 178-263
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 5.03e-32
Family Double-stranded RNA-binding domain (dsRBD) 0.0000104
Further Details:      
 
Domain Number 3 Region: 3-76
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 4.09e-25
Family Double-stranded RNA-binding domain (dsRBD) 0.0000118
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000009059   Gene: ENSCJAG00000004821   Transcript: ENSCJAT00000009571
Sequence length 1268
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:18:23177556:23227789:-1 gene:ENSCJAG00000004821 transcript:ENSCJAT00000009571 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGDVKNFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYNYTGMGNSTNKKDAQSN
AARDFVNYLVRINEIKSEEVPAFGVASPPPLTDTPDTTANAEGGLPTTMGGPLPPHLALK
AAENNSEGGASSYGVPEPNWDRGANLKDYYSRKEEQEVQAVRLAPYISENMIWDLVNNWV
NLLRGYFRKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSC
ALSLVRQLYHLGVVEAYSGLTKKKEGETVEPYKVNISQDLEHQLQNIIQELNLEILPPPE
DPSVPVALNIGKLAQFEPSQRQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAFATPEQISM
DLKNELMYQLEQDHELQGILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVP
QFILDEFIQTDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRP
HASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLM
SATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFIPPPKDKKKSQADNIFVK
RNTANCNLICGDEYGPETRLSMSQLNEKETPFELIESLLKYIETLNVPGAVLVFLPGWNL
IYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITI
NDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF
ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDAL
DANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKRLGY
IHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKE
ILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALI
HKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQIV
LVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQPAIISQLDPINERMLNMIRQISRPS
AAGINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYGGGGYGSGYSSGGYGTGGYGGS
ANSFRAGYGAGVGGGFRGVSRGGYRGNSGGDYRGPIGGFRGSGGFQRGGIRGGYGTGYFG
PGRGGGGY
Download sequence
Identical sequences F7I6E2
ENSCJAP00000009059

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]