SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000009081 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000009081
Domain Number 1 Region: 40-157
Classification Level Classification E-value
Superfamily TPR-like 1.14e-19
Family Tetratricopeptide repeat (TPR) 0.0081
Further Details:      
 
Domain Number 2 Region: 864-902
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000137
Family Classic zinc finger, C2H2 0.054
Further Details:      
 
Domain Number 3 Region: 916-950
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000275
Family CCCH zinc finger 0.0048
Further Details:      
 
Domain Number 4 Region: 514-543
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000824
Family CCCH zinc finger 0.005
Further Details:      
 
Weak hits

Sequence:  ENSCJAP00000009081
Domain Number - Region: 787-819
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000159
Family CCCH zinc finger 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000009081   Gene: ENSCJAG00000004889   Transcript: ENSCJAT00000009593
Sequence length 990
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:1:202005878:202063259:1 gene:ENSCJAG00000004889 transcript:ENSCJAT00000009593 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RLMERQKRKADIEKGLQFIHSLSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQAL
VQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYEKALEDSEKALGLDSESI
RALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQI
NLRQAWGQGLLGALQGPADCVRVSLLSQRKEAVMVDIQALSLDQELGEEDCYVDPRGSPA
LLPSTPTMPLFPHVLDLLAPLDSSRTLPSTESLDDFSDGDVFGPELDTLLDSLARAVPSS
SDPSLCPCLVVSGPSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRL
DALDSFGSTRGSLDKPDSFMVLSTVWSWGVSPLHGAECCMPHGGAPQSGWIRGSISGLQT
QPGLEFKRPSSPEPCMPNTALLIKNPLAATHEFKQACQLCYPKTGPRAGDYTYREGLEHK
CKRDILLGRLRSSEDQTWKRIRPRPTKTSFVGSYYLCKDMINKQDCKYGDNCTFAYHQEE
IDVWTEERKGTLNRDLLFDPLGGVKRGSLTIAKLLKEHQGIFTFLCEICFDSKPRIISKG
TKDSPSVCSNLAAKHSFYNNNQWRVHFSSEAEIRGCPGRDWHGKGGPARRXVRAGWCSEG
GCMYPCHHLISNILWGGGIKCGMTHEDIVQESKKYWQQMEAHTGKASSSVGTSRTHGPST
FDLQMKFVCGQCWRNGQVVEPDKDLKYCSAKARHCWTKERRVLLVMSKAKRKWVSVRPLP
SIRNFPQQYDLCIHAQNGRKCQYVGNCSFAHSPEERDMWTFMKENKILDMQQTYDMWLKK
HNPGKPGEGTPISSREGEKQIQMPTDYADIMMGYHCWLCGKNSNSKKQWQQHIQSEKHKE
KVFTSDSDASGWAFRFPMGEFRLCDRLQKGKACPDGDKCRCAHGQEELNEWLDRREVLKQ
KLAKARKDMLLCPRDDDFGKYNFLLQEDVD
Download sequence
Identical sequences F7I1M8
ENSCJAP00000009081

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]