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  Home > Genomes > Callithrix jacchus 76_3.2.1 > ENSCJAP00000018994

Domain assignment for ENSCJAP00000018994 from Callithrix jacchus 76_3.2.1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000018994
Domain Number 1 Region: 2999-3257
Classification Level Classification E-value
Superfamily YWTD domain 7.32e-57
Family YWTD domain 0.0000016
Further Details:      
 
Domain Number 2 Region: 1267-1532
Classification Level Classification E-value
Superfamily YWTD domain 1.57e-52
Family YWTD domain 0.00000195
Further Details:      
 
Domain Number 3 Region: 1890-2150
Classification Level Classification E-value
Superfamily YWTD domain 4.32e-45
Family YWTD domain 0.0000114
Further Details:      
 
Domain Number 4 Region: 1582-1839
Classification Level Classification E-value
Superfamily YWTD domain 2.88e-43
Family YWTD domain 0.0000226
Further Details:      
 
Domain Number 5 Region: 3850-4121
Classification Level Classification E-value
Superfamily YWTD domain 3.27e-43
Family YWTD domain 0.00000572
Further Details:      
 
Domain Number 6 Region: 535-768
Classification Level Classification E-value
Superfamily YWTD domain 1.57e-39
Family YWTD domain 0.0000109
Further Details:      
 
Domain Number 7 Region: 199-468
Classification Level Classification E-value
Superfamily YWTD domain 1.44e-38
Family YWTD domain 0.0000808
Further Details:      
 
Domain Number 8 Region: 2199-2468
Classification Level Classification E-value
Superfamily YWTD domain 9.02e-35
Family YWTD domain 0.000038
Further Details:      
 
Domain Number 9 Region: 1180-1259,1525-1577
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000439
Family Growth factor receptor domain 0.021
Further Details:      
 
Domain Number 10 Region: 847-889
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000524
Family LDL receptor-like module 0.0000883
Further Details:      
 
Domain Number 11 Region: 3545-3585
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000113
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 12 Region: 928-967
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00079
Further Details:      
 
Domain Number 13 Region: 3629-3674
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 14 Region: 3507-3547
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000196
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 15 Region: 3587-3623
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000262
Family LDL receptor-like module 0.00047
Further Details:      
 
Domain Number 16 Region: 24-63
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000275
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 17 Region: 3339-3383
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000367
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 18 Region: 1012-1050
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.000088
Further Details:      
 
Domain Number 19 Region: 2698-2735
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000458
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 20 Region: 888-930
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000576
Family LDL receptor-like module 0.00056
Further Details:      
 
Domain Number 21 Region: 2565-2605
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000183
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 22 Region: 1055-1095
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000262
Family LDL receptor-like module 0.00013
Further Details:      
 
Domain Number 23 Region: 2738-2772
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000262
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 24 Region: 3418-3456
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000419
Family LDL receptor-like module 0.00087
Further Details:      
 
Domain Number 25 Region: 2820-2856
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 26 Region: 2605-2644
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000851
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 27 Region: 3381-3419
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000114
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 28 Region: 141-188
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000127
Family EGF-type module 0.004
Further Details:      
 
Domain Number 29 Region: 2778-2812
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000017
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 30 Region: 3302-3337
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000196
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 31 Region: 3716-3752
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000406
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 32 Region: 2945-2986
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000194
Family EGF-type module 0.0063
Further Details:      
 
Domain Number 33 Region: 3263-3318
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000003
Family EGF-type module 0.015
Further Details:      
 
Domain Number 34 Region: 1103-1138
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000301
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 35 Region: 2534-2573
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000353
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 36 Region: 801-846
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000374
Family EGF-type module 0.041
Further Details:      
 
Domain Number 37 Region: 1141-1176
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000393
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 38 Region: 1844-1894
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000106
Family EGF-type module 0.012
Further Details:      
 
Domain Number 39 Region: 973-1009
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000115
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 40 Region: 2664-2693
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000196
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 41 Region: 2153-2200
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000112
Family EGF-type module 0.012
Further Details:      
 
Domain Number 42 Region: 3670-3708
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000236
Family LDL receptor-like module 0.0035
Further Details:      
 
Domain Number 43 Region: 71-105
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000406
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 44 Region: 3761-3809
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000524
Family EGF-type module 0.052
Further Details:      
 
Weak hits

Sequence:  ENSCJAP00000018994
Domain Number - Region: 4175-4208
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000102
Family EGF-type module 0.042
Further Details:      
 
Domain Number - Region: 3800-3836
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000175
Family EGF-type module 0.0091
Further Details:      
 
Domain Number - Region: 4246-4281
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00067
Family EGF-type module 0.041
Further Details:      
 
Domain Number - Region: 485-521
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000671
Family EGF-type module 0.016
Further Details:      
 
Domain Number - Region: 4213-4246
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000726
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 4352-4390
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00265
Family EGF-type module 0.044
Further Details:      
 
Domain Number - Region: 115-149
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00268
Family EGF-type module 0.026
Further Details:      
 
Domain Number - Region: 2486-2527
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0117
Family EGF-type module 0.038
Further Details:      
 
Domain Number - Region: 4129-4161
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0678
Family EGF-type module 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000018994   Gene: ENSCJAG00000010289   Transcript: ENSCJAT00000020064
Sequence length 4520
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:9:45927505:46015926:1 gene:ENSCJAG00000010289 transcript:ENSCJAT00000020064 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MLTPPWLLLLPLLSALVAAAIDAPKTCSPKQFACRDQITCISKGWRCDGERDCPDGSDEA
PEICPQSKAQRCQPNEHNCLGTEVCIPMSRCNGVQDCVDGSDEGPHCRELRGNCSRLGCQ
HHCVPTLDGPTCYCNSSFQLQADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLL
QPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANET
VCWVHVGDSASQTQLKCARMPGLKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDID
DRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGKVFFTDYGQIPKVERCDMDGQNRTKL
VDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQGILIEHLYGLTVFEN
YLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALHIYHQRRQPRVRSHACEND
QYGKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGM
DMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGI
HNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGW
MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD
RIETILFNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGIGGAPPTVTL
LRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADGVT
CLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCHEHTCPSDRFK
CENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDC
GDRSDESASCAYPTCFPLTQFTCNNGRCININWCDNDNDCGDNSDEAGCSHSCSSTQFKC
NSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWHC
DGDTDCMDSSDEKSCEGVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCEDNSDEENCES
LACRPPSHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCDQCSLNNGGCSHNCSVAPGE
GIVCSCPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCR
SLDPFKPFIIFSNRHEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIY
RGKLLDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLL
AGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVD
YLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLA
KANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPMAPNPCEANGGRGPCSHLCLINYNRTVS
CACPHLMKLHKDNTTCYEFKKFLLYARQMEIRGVDLDAPYYNYIISFTVPDIDNVTVLDY
DAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKK
QINVARLDGSFKNAVVQGLEQPHGLVVHPLRGKLYWTDGDNISMANMDGSSRTLLFSGQK
GPVGLAIDFPESKLYWISSGNHTINRCNLDGSGLEVIDTMRSQLGKATALAIMGDKLWWA
DQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDHKGTNPCSVNNGDCSQLCL
PTSETTRSCMCTAGYSLRSGQQACEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTS
LAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWT
DQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTE
RVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVLSSNNMDMFSVS
VFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFNRDRQKGTNMCAVA
NGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTILKSIHLSDEHNLNA
PVQPFEDPEHMKNVIALAFDYRAGTSPGTPNRIFFSDIHFGNIQQINDDGSRRITIVENV
GSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGAFERETVITMSGDDHPRAFVLDEC
QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIE
RCEYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKHVGSNMKLLRVDIPQ
QPMGIIAVANDTNSSLRLPCLCSRELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQE
DLTCRVREGGRGRGWQCANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCNN
GRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDCEDASD
EMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGGQWQV
CPLNYFACPSGRCIPMSWTCDKEDDCEHGEDETHCNKFCSEAQFECQNHRCISKQWLCDG
SDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYN
STCDDREFMCQNRQCIPKHFVCDHDRDCADGSDESPECVSPRRWWEGPCLHWVRHQLTGP
FLSQRPDSQLGGLSTHVVLPLARLGRGDPGLLAGSAGWKAWTCHTPSPRLPVHSAFCRPG
FRLKDDGRTCADVDECGTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPF
LIFANRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNG
SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRAL
VVDVQNGYLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADARE
DYIEFASLDGSNRHVVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGTNKTLLIS
TLHRPMDLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGGYKCACPTNFYLGSDGRTC
VSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPA
FICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPE
VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCSELPGLEPSSLPSVCCSHHPD
KRPPQWPLSRPPGTLLEGGSSSPYDLCYERTCEPYQFRCKNNRCVPGRWQCDYDNDCGDN
SDEESCTPRPCSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGH
CIPLRWRCDADADCMDGSDEEACSTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSD
ENPEECAQFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTTHCKDK
KEFLCRNRRCLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCTANASICGDEARCVRTEKA
AYCACRSGFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEG
SEYQVLYIADDNEIRSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTI
SYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV
AQMKGENRKTLISGMIDEPHAIVVDPLRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNI
QWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYG
VTYINNRVFKIHKFGHSPLVNLTGALSHASDVVLYHQHKQPEVTNPCDRKKCEWLCLLSP
SGPVCTCPNGKRLDNGTCMPVPSPTPPPDASRPGTCNLQCFNGGSCFLNARRQPKCRCQP
RYTGDKCELDQCWEHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQVCAGYCANNSTCTV
NQGNQPQCRCLPGFLGDRCQYRQCSGYCENFGTCQMAADGSRQCRCTAYFEGPRCEVNKC
SRCLEGACVVNKQSGDVTCNCTDGRVAPSCLTCVGHCSNGGSCTMNSKMMPECQCPPHMT
GPRCEEHVFSQQQPGHMASILIPLLLLLLLLLVAGVVFWYKRRVQGAKGFQHQRMTNGAM
NVEIGNPTYKMYEGGEPDDVGGLLDADFALDPDKPTNFTNPVYATLYMGGHGSRHSLAST
DEKRELLGRGPEDEIGDPLA
Download sequence
Identical sequences F7GPY3
ENSCJAP00000018994 ENSCJAP00000018994

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.