SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000020553 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000020553
Domain Number 1 Region: 544-601
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.28e-25
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 2 Region: 656-713
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.35e-24
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 3 Region: 432-489
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.08e-24
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 4 Region: 264-321
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.26e-24
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 5 Region: 320-377
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.96e-23
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 6 Region: 1-59
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 2.35e-23
Family KRAB domain (Kruppel-associated box) 0.0015
Further Details:      
 
Domain Number 7 Region: 376-433
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.04e-22
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 8 Region: 600-657
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.27e-22
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 9 Region: 712-769
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.59e-22
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 10 Region: 488-545
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.77e-20
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 11 Region: 208-265
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000403
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 12 Region: 754-799
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000222
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 13 Region: 152-209
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000227
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 14 Region: 784-839
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000406
Family Classic zinc finger, C2H2 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000020553   Gene: ENSCJAG00000011143   Transcript: ENSCJAT00000021724
Sequence length 839
Comment pep:known_by_projection scaffold:C_jacchus3.2.1:GL285948.1:4175:15984:-1 gene:ENSCJAG00000011143 transcript:ENSCJAT00000021724 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QGLLTFRDVAIEFSLEEWQCLDAAQRNLYKNVILENYRNLVFLGIAVSKPDLIACLEQEK
EPLIMKRDEMADEPPVMCSHFAQEFWPEQNIKDSSQNMTLRRYEQCGNENFQLNGCKSVA
ECKVHKGGFNGLNQCLPTTQSKMFPCDKYVRVFHKFSHADRHKIKHMENKHFKCKECGKS
FCMLSRLTQHKRIYTRMNFCKCEECEKAFNQSSKLTTQKRIYTCKKLYKCQECDKAFTQF
SKLTAYKKNYTREKSYKCEECGKAFKWFSRLTTHKRIHTGEKPYKCEECGKAFNHFSTLT
THKRIHTGELPYICEECGKAFKQSSALTTHKIIHTEDKPYKCKECGKAFKQSSALSTHKR
IHTGEKPYKCEECGNAFKHSHSLTTHKRIHTGEKPYICEACGKSFNRFSNLTEHKNIHTG
EQPYKCEECGKAFKRSSNFTEHKKIHTEEKPYKCKECGKAFKHSSALTTHKRIHTGEKPY
KCEECGKAFYRSSKRSEHKKLHTGMKPYKCEKCGKAFNQSTSLTTHKRIHTGENLYKCEE
CGKAFTQSSTLITHKRIHTGEKPYKCEECGKAFTKSSTLTKHQRIHTGEQPYVCEKCGKA
FNQFSTLNTHKKIHTGEKIYKCEECGKAFNHFSTLTTHKRVHTGELPYICEECGKAFTRP
SILTAHKIIHTGEKPYKCKECGKAFNHSHSLTTHKRIHTGEKPYKCEECGKAFHRSSNFI
EHKKIHTEEKPYKCKECGKAFNRSSKLTKHKIVHTGEKPYKCERCDKAFNRSENLARHKK
IHIGEKIQKTERCDNDFDNNLSFSKYKIIHTGEKHNKCNYCPKEKHKPLKLRKHKRVYT
Download sequence
Identical sequences H9KWS5
ENSCJAP00000020553 ENSCJAP00000020553

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]