SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000021794 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSCJAP00000021794
Domain Number - Region: 457-496
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0329
Family EGF-type module 0.079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000021794   Gene: ENSCJAG00000011857   Transcript: ENSCJAT00000023035
Sequence length 731
Comment pep:novel chromosome:C_jacchus3.2.1:12:380711:386190:-1 gene:ENSCJAG00000011857 transcript:ENSCJAT00000023035 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ETGLVSEHFSQAPQRLSFYSWYGSARLFRFRVPPDTVLLRWLLQVSRDSGATCTDAEITV
HFRSGAPPVINPLGTRFPDNTSVQPSFQVRLPLSAAPLSNVSVNVSHPAPGDWFVAAHLP
PSSQKIELKGLAPTCSYVFQPDMLAKRVVEISIVEPDVPFPQTLVSHPSYLKVFVPEYTR
ELLLELKGCVSHGSLGCPVRLTVGPVTLPGNFQKVLTCAGAPQPCRLLLPSPPWDRWLQL
TAESLVGPHGTVAFSAVATLTACRPWSVTVQPFLQSVWNQTFNASVGWPSPGPDHRDLGR
SGGVGGGPFCLTNHPVTREDTDVVSVHFQPLDRLSVTVRSDTPSVMRLRLNTGMDSGGSL
TVSLRANRTEIRNGTVVVACMNAASPFLSFNTSLNCTTAFFQGYPLSLSAWSLKANLIIP
YPETDNWYLSLQLMCSDNEEDCEQAAVHVETTLYLVPCLNDCGPYGQCLLLRRHGYLYAG
CSCKAGWRGWSCTDNSTAQTVAQQKAATLLLTLSNLMFLAPIAVSVQRFYLVEASVYAYT
MFFSTFYHACDQPGEAVLCILSYDTLQYCDFLGSGVAIWVTILCMARLKTLLKYVLFLLG
TLVIAMSLQLDRRGIWNMLGPCLFAFVIMASMWVYRCGHRRQCYPTSWQRWAFYLLPGVS
MASVGIAIYTSMMTSDNYYYTHSIWHVLLAGSAALLLPPPAEPAEPWACSPKFPCHYQIC
KNDREELYTVT
Download sequence
Identical sequences F6SSA3
ENSCJAP00000021794 ENSCJAP00000021794

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]