SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000022696 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000022696
Domain Number 1 Region: 190-266
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 6.8e-17
Family HLH, helix-loop-helix DNA-binding domain 0.0008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000022696   Gene: ENSCJAG00000012389   Transcript: ENSCJAT00000024012
Sequence length 557
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:5:61081176:61096952:1 gene:ENSCJAG00000012389 transcript:ENSCJAT00000024012 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSIETLLEAARFLEWQAQQQQRAREEQERRRLEREREQEQKKANSLARLAHALPVEEPRI
EAVTVIPIPVVTNSPQPPTAQPLPLVPRQPALVSTPGLSIKEPAPLPSRPQVPTPAPLLP
DSKTTIPPTGSPKPLQPLPTPILTIAPHPGVQPQLAPPQPPPPTLGTLKLAPAEEVKSSE
QKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNVDDKKTSNLSVLRTALRYIQSL
KRKEKEYEHEMERLAREKIATQQRLAELKHELSQWMDVLEIDRVLRQTGQPEDDQASTST
ASEGEDNIDEDMEEDRAGLGPPKLSHHPQPELLKPTMPPPSTTPAPLPPHPHPHPHSVAL
SPAHLPVQQPQTQQKTPLPAPPPQPAAPAQTLVPAPAHLVATAGGGSTVIAHTATTHASV
IQTVNHVLQGPGGKHVAHIAPSAPSPAVQLAPATPPIGHITVHPATLNHVAHLGSQLPLY
PQPVAVSQPVAVSHIAHTLSHQQVNGTAGLGSPATVMTKPAVGAQVVHHPQLVGQTVLNP
VTMVTMPSFPVSTLKLA
Download sequence
Identical sequences F7IMJ3
ENSCJAP00000022696

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]