SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000026838 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000026838
Domain Number 1 Region: 13-134,178-352
Classification Level Classification E-value
Superfamily WD40 repeat-like 8.24e-24
Family WD40-repeat 0.011
Further Details:      
 
Domain Number 2 Region: 281-466,519-605
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.0000000022
Family WD40-repeat 0.021
Further Details:      
 
Domain Number 3 Region: 803-927
Classification Level Classification E-value
Superfamily TPR-like 0.00000759
Family Tetratricopeptide repeat (TPR) 0.03
Further Details:      
 
Domain Number 4 Region: 960-1148
Classification Level Classification E-value
Superfamily ARM repeat 0.0000334
Family Leukotriene A4 hydrolase C-terminal domain 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000026838   Gene: ENSCJAG00000014532   Transcript: ENSCJAT00000028368
Sequence length 1460
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:12:1576374:1680501:-1 gene:ENSCJAG00000014532 transcript:ENSCJAT00000028368 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MALYFDHRIEAPDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVER
PFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHPVSPTHTADITVLSWSPSGNCLLS
GDRLGVLLLWKLDQRGRVQGLPLLKHEYGKHLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWKKSSSGRLLKLGSQEGLSFFVSLMDGTVHYVDENGKTTQVVSADSAIHTLFYVE
KREALVVVTENLRLSLYMVPPEGEAKEVMKVKLSGKTGHQADITLIDGSLLVMAVGETAL
RFWDIERGENYILSPDEKFGFEKGENINCVCYCEVKGLLAAGTDRGRVAMWRKVPGLLGS
PGAEGRDRWALQTPTELQGNITQIQWGSRKNLLAVNSVISVAILSEQAMSSHFHQQVAAV
QVSPSLLNVCFLSTGAAHSLRTDMHVSGVFATKDAVAVWNGREVAIFELSGATIQSAGTF
LCETPVLAMHEESVYTVEPNRVQVRTWQGTVKQLLLFSETEGNPCFLDICGNFLVVGTDL
AHFKSFDLSRREAKAHCSCRSLAELVPGSGGITSLRCSSSGSTISILPSKADNSPSSKIC
FYDVEMDAVTIFDFKTGQIDHRETPSSHEQETNKSYLFADEGLKNYVPLNHFWDQSEPQL
FVCEAVQEVPGSQPQFADGQPHDGNASPRADVLILSFFISEEHGFLLHESFPRPSAYHSL
LGMEVPYYYFTRKPEVSDREDKVESGCHHIPQMVARRPLRDFVGLEDCDKATRDAMLHFS
FFVTIGDMDEAFKSIKLIRSEAVWENMARMCVKTQRLDVAKVCLGNMSHARGARALREAE
QEPELEARVAMLAMQLGMLEDAEQLYRKCQRYDLLNKFYQASGQWQKALKVAERHDRVHL
RRTCHHYAKHLEASADYSQALSYYEKSDTHRFEVPRMLLEDLPSLELYVNKMEDKTLWRW
WAQYLESQGEMDTALHYYQLAQDHFSLVRIHCFQGNIQKAAQIANKTGNLAASYHLARQY
ESQEEVGQAVHFYTQAQAFKNAIRLCKENSLDGQLMNLALLSSPEDMIEVARYYEKATQV
DRAVMLYHKAGHLSKALELAFASQQFMALQLIAEDLDETSDPELLARCSDFFIEHSQYER
AVQLLLAARKYHEALQLCLEQNMTITEEMAEKMTVSKDSTDLPEESRRELLEQIANCCMR
QGSYHLATKKYTQAGNKLKAMRALLMSGDTEKITFFASVSRQKEIYIMAANYLQSLDWRK
EPEIMKNIISFYTKGRALDLLASFYDACAQVEIDEYQNYGKAHGALTEAYKCLSKAKAKS
ALDQETRLAQLQSRMALVKRFLQARRTYAEDPKASIKQCELLLEEPDLDSTVRIGDVYGF
LVERHVQTEEYQTAYRFLEEMRRRLPSANVSYYVSPQAVEAVHQGLGLPLMHAAPERVRH
NSMEDPREPDEEVVEEADDP
Download sequence
Identical sequences F7I6Q2
ENSCJAP00000026769 ENSCJAP00000026838 XP_009007142.1.60252 XP_009007143.1.60252

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]