SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000029184 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000029184
Domain Number 1 Region: 56-88,228-257
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.0000022
Family Anti-sigma factor antagonist SpoIIaa 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000029184   Gene: ENSCJAG00000015817   Transcript: ENSCJAT00000030837
Sequence length 279
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:4:36892613:36915046:-1 gene:ENSCJAG00000015817 transcript:ENSCJAT00000030837 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMTFLSSVFLGLDIGLIISVVFAFFITTVRSHRMKIVLLGQIPNTNIYRNVNDYREIITI
PGVKIFQCCSSITFVNVYHLKHKLLKEVDMVRVPLKEEEIFTLFNSSDTNLQEQKICRCF
CNCDDLEPLPRIVYTERFENKLAPKASSINLIHCSGFESVNTSQTSSEDQVPYTVSSVSQ
KNQGQQLEEVENVLLPNNPSRNSLPGLPNMAESRGRSRSLIPSSDAPLLPSVHTIILDFS
MVHYVDARGLVVLRQASTGEALAEALIHLLPSQPHPDPD
Download sequence
Identical sequences F7I5I2
ENSCJAP00000029184

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]