SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000030385 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000030385
Domain Number 1 Region: 79-147
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000139
Family Complement control module/SCR domain 0.0019
Further Details:      
 
Domain Number 2 Region: 137-175
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000365
Family EGF-type module 0.012
Further Details:      
 
Domain Number 3 Region: 221-281
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000067
Family EGF-type module 0.01
Further Details:      
 
Weak hits

Sequence:  ENSCJAP00000030385
Domain Number - Region: 195-232
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00102
Family EGF-type module 0.022
Further Details:      
 
Domain Number - Region: 273-304
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00629
Family EGF-type module 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000030385   Gene: ENSCJAG00000016508   Transcript: ENSCJAT00000032107
Sequence length 439
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:14:16818981:16870230:1 gene:ENSCJAG00000016508 transcript:ENSCJAT00000032107 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVPSSPRALFLLLLLLACSEPRASQNCLNKQQLISAIRQLQQLLKGQETRFAEGIRHMKS
RLAALQNSVSRVAPDAPPVSCLALNAPADGRKFGSKYLVDHEVHFTCNPGFRLVGPSSVV
CLPNGTWTGEQPHCRGISECSSQPCQNGGTCVEGVSQYRCICPSGRTGNRCQHQAQTAAP
EGSVAGDSAFSRAPRCAQVERAQHCSCEAGFQLSGAAGDSVCEDVNECELYGQEGRPRLC
MHACVNTPGSYRCTCPSGYRTLADGKSCEDVDECAGLQPVCPRGTTCINTGGGFQCVSPE
CPEGSGNVSYVKTSPFQCERNPCPMDSRPCHHLPKTISFHYLSLPSNLKTPITLFRMATA
SAPGRAGPNSLRFGIVGGNSRGHFVMQRSDRQTGELILVQTLEGPQTLEVDVDMSEYLDR
SFQANHVSKVTIFVSPYDF
Download sequence
Identical sequences F6V6T9
ENSCJAP00000030385 ENSCJAP00000030379

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]