SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000034710 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000034710
Domain Number 1 Region: 218-500
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 7.37e-94
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.000000113
Further Details:      
 
Domain Number 2 Region: 41-217
Classification Level Classification E-value
Superfamily ThrRS/AlaRS common domain 3.53e-54
Family Threonyl-tRNA synthetase (ThrRS), second 'additional' domain 0.0000902
Further Details:      
 
Domain Number 3 Region: 502-610
Classification Level Classification E-value
Superfamily Class II aaRS ABD-related 6.04e-28
Family Anticodon-binding domain of Class II aaRS 0.0012
Further Details:      
 
Domain Number 4 Region: 4-39
Classification Level Classification E-value
Superfamily TGS-like 0.00000948
Family TGS domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000034710   Gene: ENSCJAG00000018663   Transcript: ENSCJAT00000036656
Sequence length 619
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:2:169826009:169852385:-1 gene:ENSCJAG00000018663 transcript:ENSCJAT00000036656 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEVELSQGLADNTVIAKVNNVVWDLDRPLEEDCTLALLKFEDEEAQAVYWHSSAHIMGEA
MERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKE
TLLAMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTY
WEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCF
FLPKGAYIYNALIDFIRSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKE
QFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAH
IFCAMEQIEDEIKGCLDFLRMVYSVFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLN
EFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKK
RPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPSCDEYAQKVRQQFHAA
KFMADVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTVSET
VERLQQLKESRSKQAEEEF
Download sequence
Identical sequences F7ID22
ENSCJAP00000034710

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]