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Domain assignment for ENSCJAP00000039604 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000039604
Domain Number 1 Region: 530-608
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000285
Family Canonical RBD 0.016
Further Details:      
 
Domain Number 2 Region: 864-934
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000111
Family Canonical RBD 0.023
Further Details:      
 
Weak hits

Sequence:  ENSCJAP00000039604
Domain Number - Region: 290-316
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000103
Family CCCH zinc finger 0.004
Further Details:      
 
Domain Number - Region: 9-76
Classification Level Classification E-value
Superfamily PWI domain 0.00235
Family PWI domain 0.01
Further Details:      
 
Domain Number - Region: 692-754
Classification Level Classification E-value
Superfamily FtsH protease domain-like 0.0785
Family FtsH protease domain-like 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000039604   Gene: ENSCJAG00000021261   Transcript: ENSCJAT00000041842
Sequence length 983
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:1:35151874:35241672:1 gene:ENSCJAG00000021261 transcript:ENSCJAT00000041842 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVSKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKF
SRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPS
ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK
GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL
RPPVPPPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
SLFTADTYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPNKSS
MRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVP
PELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIK
VYWHREGSTQQLQTTASKVMQPLVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSATSDL
PQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEI
LEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLEVLTKNITKLKDEVKAVSPGRCLPKSI
KTKTQMQKELLDTELDLYKKMQAGEEVTELRRKYTELQLEAAKRGILSSGRGRGIHSRGR
GAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDS
SLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWNKPVTNISAVETEEVEPDEEEFQEESL
VDDSLLQDDDEEEEDNESRSWRR
Download sequence
Identical sequences F7GZB9
XP_003731968.1.60252 ENSCJAP00000039604

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