SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000043731 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000043731
Domain Number 1 Region: 8-58
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000108
Family RING finger domain, C3HC4 0.013
Further Details:      
 
Domain Number 2 Region: 409-441
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000000327
Family CCCH zinc finger 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000043731   Gene: ENSCJAG00000020050   Transcript: ENSCJAT00000054588
Sequence length 478
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:1:166641321:166689124:-1 gene:ENSCJAG00000020050 transcript:ENSCJAT00000054588 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATEVLKQQGKLLQVQMEFQMQKTVFPS
Download sequence
Identical sequences A0A2K5E083 A0A2K5P9M7 F7HRX5
ENSCJAP00000043731

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]