SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000046613 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000046613
Domain Number 1 Region: 136-158
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000549
Family CCCH zinc finger 0.0045
Further Details:      
 
Domain Number 2 Region: 40-61
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000994
Family CCCH zinc finger 0.0054
Further Details:      
 
Weak hits

Sequence:  ENSCJAP00000046613
Domain Number - Region: 74-100
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0408
Family CCCH zinc finger 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000046613   Gene: ENSCJAG00000011803   Transcript: ENSCJAT00000022900
Sequence length 160
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:9:44861513:44865820:1 gene:ENSCJAG00000011803 transcript:ENSCJAT00000022900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPDRDSYANGTGSSGGGPGGGGSEEASGAGAGSGAASSDAICRDFLRNVCKRGKRCRYRH
PDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIHGSKEDEDGYKKTGELPPRLRQKVA
AGLGLSPADLPNGKEEVPICRDFLKGDCQRGAKCKFRHLQ
Download sequence
Identical sequences F7HMW8
ENSCJAP00000046613 ENSCJAP00000046613

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]