SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000046809 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSCJAP00000046809
Domain Number - Region: 174-199
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.001
Family CCCH zinc finger 0.0034
Further Details:      
 
Domain Number - Region: 17-40
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0314
Family CCCH zinc finger 0.0043
Further Details:      
 
Domain Number - Region: 211-233
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0738
Family CCCH zinc finger 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000046809   Gene: ENSCJAG00000004080   Transcript: ENSCJAT00000063654
Sequence length 351
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:X:120219010:120284380:-1 gene:ENSCJAG00000004080 transcript:ENSCJAT00000063654 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTAVNVALIRDTKWLTLEVCREFQRGTCFRADADCKFAHPPRVCHVENGRVVACFDSLKG
RCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMA
PSLPNPPMAFNPYMPHPGMGLVPAELVPNPPVLIPGNPPLALTGAIGPKLMRSDKLEVCR
EFQRGNCTRGENDCRYAHPTDASMIEVGDNTVTICMDYIKGRCSREKCKYFHPPAHLQAK
LKAAHHQMNHSAAMALQHGTLQLIPKRSALEKPNGATPVFNPSVFHCQQALTNLPLPQPA
YIPAGPILCMAPASSIVPMMHGATPTTVSAATTPATSVPFAATTTGNQLKY
Download sequence
Identical sequences F7HMR8
XP_017824030.1.60252 ENSCJAP00000046809

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]