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  Home > Genomes > Callithrix jacchus 76_3.2.1 > ENSCJAP00000051910

Domain assignment for ENSCJAP00000051910 from Callithrix jacchus 76_3.2.1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000051910
Domain Number 1 Region: 136-391
Classification Level Classification E-value
Superfamily YWTD domain 2.22e-42
Family YWTD domain 0.0000216
Further Details:      
 
Domain Number 2 Region: 1016-1294
Classification Level Classification E-value
Superfamily YWTD domain 1.31e-31
Family YWTD domain 0.0000505
Further Details:      
 
Domain Number 3 Region: 12-128,380-446
Classification Level Classification E-value
Superfamily Growth factor receptor domain 9.1e-22
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 4 Region: 924-1040,1286-1333
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000471
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 5 Region: 881-921
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000432
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 6 Region: 753-789
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000903
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 7 Region: 673-709
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000157
Family LDL receptor-like module 0.00084
Further Details:      
 
Domain Number 8 Region: 596-632
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000249
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 9 Region: 474-518
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000275
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 10 Region: 797-841
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000393
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 11 Region: 714-751
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000825
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 12 Region: 436-471
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000118
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 13 Region: 631-671
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000249
Family LDL receptor-like module 0.0009
Further Details:      
 
Domain Number 14 Region: 557-593
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000301
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 15 Region: 516-553
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000484
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 16 Region: 1415-1450
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000067
Family EGF-type module 0.022
Further Details:      
 
Domain Number 17 Region: 843-875
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000157
Family LDL receptor-like module 0.003
Further Details:      
 
Domain Number 18 Region: 1517-1555
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000173
Family EGF-type module 0.04
Further Details:      
 
Domain Number 19 Region: 1339-1378
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000585
Family EGF-type module 0.016
Further Details:      
 
Weak hits

Sequence:  ENSCJAP00000051910
Domain Number - Region: 1378-1415
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000101
Family EGF-type module 0.017
Further Details:      
 
Domain Number - Region: 1452-1484
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00796
Family EGF-type module 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000051910   Gene: ENSCJAG00000012158   Transcript: ENSCJAT00000063472
Sequence length 1728
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:6:79139745:79405708:1 gene:ENSCJAG00000012158 transcript:ENSCJAT00000063472 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCNNEDDCGDGSDERNCHINECLSKKVSGCS
QDCQDLPISYKCKCWPGFQLKDDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEI
QPDNPNGCKSLSDEEPFLILADHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYW
IDSSRPNGSRINRMCLNGSDIKVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGL
YPTILVSKRLKFPRDLSLDPQAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMAL
TIDYVNHRLYWADENHIEFSNMDGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSR
AHKTSGANRFSLINSWHAITDIQVYHSYRQPDVVFKHLCMINNGGCSHLCLLAPGKTHTC
ACPTNFYLAADNRTCLSNCTASQFRCKTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQ
PGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNG
QDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGP
HEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCKPQTCTLKDFLCANGDCVSSRFWCDGDF
DCADGSDERNCEMSCSKDQFQCSNGQCIPAKWKCDGHEDCKYGEDEKSCEPASPTCSSSE
YICASGGCMSASLKCNGEYDCADGSDEMDCVTECKEDQFRCKNKAHCIPIRWLCDGIHDC
VDGSDEENCDRDKGGNICRADEFLCNNSLCKLHFWVCDGEDDCGDNSDEAPDMCVKFLCP
PTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCSGKLTYKARPCKKDEFACSNKKCIP
MNLQCDRLDDCGDGSDEQGCRIAPTDYTCEDNVNPCGDDAYCNQIKTSVFCRCKPGFQRN
MKNRKCEDLNECLVFGTCSHQCINVEGSYKCECDQNFQERNNTCIAKAGSEDQVLYIAND
TDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYKRIHGRE
KRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINVGQLNG
PNCTRLLTNMAGEPYAIAVNPKRGMMYWTVVGDHSHIEEAAMDGTLRRILVQKNIQRPTG
LAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSSKQGLLHPHRIDIFEDYIYGAGPKN
GVFRVQKFGHGSVEYLALNIDKTKGVLISHRYKQLNLPNPCLDLACEFLCLLNPSGATCV
CPEGKYLINGTCNDDSLLETDDSCKLTCENGGRCIFNEKGDLRCHCWPSYSGERCEVNHC
TNYCQNGGTCIPSVLGRPTCSCALGFTGPNCGKTVCEDFCQNGGTCIVTAGNQPYCHCQP
EYTGDRCQHYVCHHYCVNSESCTIGDDGSVECVCPTRYEGPKCEIDKCVRCHGGHCIINE
DSEDIFCNCTNGKIASSCQLCDGYCYNGGTCQLDPETNVPMCLCSANWSGTQCERPAPKS
SKSDHISTRSIAIIVPLVLLVTLITTLVIGLVLCKRKRRTKTIRRQPIINGGINVEIGNP
SYNMYEVDHDHNDGGLLDPGFMIDPTKVICLKIMGINPLTFKIETYTSIFISSDKTNPIL
FQPTNYSNPVYAKLYMDGQNCRNSLGSVDERKELLPKKIEIGIRETVA
Download sequence
Identical sequences F7BG31
ENSCJAP00000051910

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.