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Domain assignment for clementine0.9_002160m|PACid:19255860 from Citrus clementina v165

Domain architecture


Domain assignment details

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Strong hits

Sequence:  clementine0.9_002160m|PACid:19255860
Domain Number 1 Region: 2-296
Classification Level Classification E-value
Superfamily ARM repeat 4.89e-66
Family MIF4G domain-like 0.000044
Further Details:      
 
Domain Number 2 Region: 479-646,727-759,807-853
Classification Level Classification E-value
Superfamily ARM repeat 4.6e-65
Family MIF4G domain-like 0.00059
Further Details:      
 
Domain Number 3 Region: 298-479
Classification Level Classification E-value
Superfamily ARM repeat 2.3e-62
Family MIF4G domain-like 0.0000506
Further Details:      
 
Weak hits

Sequence:  clementine0.9_002160m|PACid:19255860
Domain Number - Region: 636-681
Classification Level Classification E-value
Superfamily PspA lactotransferrin-binding region 0.0929
Family PspA lactotransferrin-binding region 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) clementine0.9_002160m|PACid:19255860
Sequence length 864
Sequence
MSSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHK
IPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQP
GSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERV
MAGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPR
PHLSFEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFPA
SKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFRYEYLMAETIFSQLLL
LPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRFILWFSHHL
SNFQFIWPWEEWAYVLDLPEWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPP
KGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTIKVV
VQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIDEVSLFWKNNTQNAAIAIDR
MMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGV
TLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEA
KEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKSTHADAMAVDLEEPSA
MELDNEDGRPKKSQSNGGSSGNVYNIGEKEQWCLSTLGYVKAFSRQYASEIWPHMEKLDA
EVLSEDTHPLFRRAVYSGLRRPIN
Download sequence
Identical sequences clementine0.9_002157m|PACid:19255861 clementine0.9_002160m|PACid:19255860 clementine0.9_002161m|PACid:19255859

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