SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000016211 from Gadus morhua 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000016211
Domain Number 1 Region: 179-315
Classification Level Classification E-value
Superfamily C-type lectin-like 1.33e-22
Family C-type lectin domain 0.0031
Further Details:      
 
Domain Number 2 Region: 17-68
Classification Level Classification E-value
Superfamily Kelch motif 0.0000183
Family Kelch motif 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000016211   Gene: ENSGMOG00000015116   Transcript: ENSGMOT00000016626
Sequence length 783
Comment pep:known_by_projection genescaffold:gadMor1:GeneScaffold_2229:9048:286175:-1 gene:ENSGMOG00000015116 transcript:ENSGMOT00000016626 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TAWTTCTATTSTHVPACDSWKVLPRPGLHRDANRFGHSAVVKNGSVFIFGGFSGLLLNDL
LAYTPPSCLAWADADACATAGPGVRCHWVKGQCVPWEPHLAADVVPAPFCPLRPEHDEQC
FRFSDCALHCTRGWCEDRSIVDTSRCSQKEEQECSRSANCRSCLLNLNCQWDQQQQECHV
LQLCGEDWQHIGEVCLRINSSRDSYDNAQHYCKNLGGNIASLITEKQVDFVLEELHKYHL
QGKTLSPWVGLRKINVSYWGWEDSTAFTNTSLRWLPREPSDSGFCASLERAHAAGLKANP
CTAPTDGLICEKPAVIAQSLRSRSCRTPCARRSSCANCTSQGMECMWCSSTQRCVDSSAY
VVSFPYGQCLEWQTQDCAAQNCSGLRTCGDCLGQVECGWCRDPSDTGRGVCMEGSYRGPL
KSSRAGPRDRDKERPGDRGMVLDQTMCAADRGFSWSFIQCPACKCNNHANMCAVNTGKCF
CTTKGIKGEQCQLXXXXXXXXXXXXXXXXXXCLDNLLIDYQFTFSLLQDDDHHYTAINFM
ATPEQANKNLDMSINASNNFNLNITWSLSSTAGTISGEEMPIVARSNIKEHRDSFSCEKF
NFRHHHNITFYVYVSNFSWPIKIQXXXXXXXXXXXXXXXXXXXXXCFLSLLLVAAVVWKV
KQTCWASRRREQLMRERQQMASRPFASVSMLIEVGGDQEELLQXXQFLPKPIAIEPCWGS
RASVLTVLLYLPRLPSGIPPPGQSGMAIASALADTTQQRALELKDRGLKHRKHYTGHHQG
TCV
Download sequence
Identical sequences ENSGMOP00000016211 ENSGMOP00000016211

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]