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Domain assignment for ENSGMOP00000017065 from Gadus morhua 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000017065
Domain Number 1 Region: 330-368
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000288
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 2 Region: 83-121
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000236
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 3 Region: 133-192
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000116
Family Spermadhesin, CUB domain 0.0044
Further Details:      
 
Domain Number 4 Region: 2-78
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000353
Family Spermadhesin, CUB domain 0.0078
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000017065
Domain Number - Region: 304-329
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000484
Family LDL receptor-like module 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000017065   Gene: ENSGMOG00000015909   Transcript: ENSGMOT00000017493
Sequence length 634
Comment pep:known_by_projection genescaffold:gadMor1:GeneScaffold_4179:393041:401967:1 gene:ENSGMOG00000015909 transcript:ENSGMOT00000017493 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CWIIQGNEDEPIILSFSQFSTRCKKEWVSLNSVAGEPVVLCGPTLPDPIEFPGGNVTVMH
HFLPHLFPVSSFLLSYSRPDSAECPPASFECASGRCLPLSWRCNGRVECLGEGLGADERG
CDGEEEXXXXXDWPCGGVLQTFYGTFAPPFNRGASMVCVWTVDPQDPRPLKLDLQQLELG
PRDRLAIYNRQEGSGEVIKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAASVAGRM
MGRPVCYPAVERCNYQLYCADGSDERDCTVCQPGTFHCDSDRCVFESWRCDGQVDCKDGT
DELNCTVVLPRKVITAATVGSLVCGLLLVIAMACTCKLYSLRTREYSMFAPISRQEAELI
QQQAPPSYGQLIAQGVIPPVEDFPTENPNEATSLSLRGILQLLRQDTAASPRRRRRPRFV
RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPGLHLPVAGPEDLAVQALPVL
LLVLLLVQLHASDEVLLIPLAEDAVSEDDVPMLT
Download sequence
Identical sequences ENSGMOP00000017065 ENSGMOP00000017065

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