SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000003436 from Gadus morhua 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000003436
Domain Number 1 Region: 454-793
Classification Level Classification E-value
Superfamily L domain-like 1.7e-38
Family Ngr ectodomain-like 0.017
Further Details:      
 
Domain Number 2 Region: 49-424
Classification Level Classification E-value
Superfamily L domain-like 7.48e-34
Family Ngr ectodomain-like 0.049
Further Details:      
 
Domain Number 3 Region: 857-1010
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 2.88e-25
Family Toll/Interleukin receptor TIR domain 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000003436   Gene: ENSGMOG00000003222   Transcript: ENSGMOT00000003538
Sequence length 1024
Comment pep:known_by_projection genescaffold:gadMor1:GeneScaffold_4639:30008:33635:-1 gene:ENSGMOG00000003222 transcript:ENSGMOT00000003538 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GILLKCKSFSVSLARGRTPQFFPCDNNENSTEVYCLRRPLKDIPIFTSLNVTLLDLSHTK
IREVKRHVFTGIPNLLTLKMRWNCAPKTARTRIALSCHVNIQYDAFRSLHNLTYLYLEGN
SLTTIPWLPESIKVLDLESNCIFNIIIPFGTPHLEQLLLTMNCYYENPCYQPFYIHEDVY
KELSHLKNLTLGNNNMTSIPLGLPASLTSLDLKQNTITEIPEGAFAMLPNLEDLNLEWNC
QRCDHAARPCFPCPNNAPLQLHQNSFNVINSSLVYLSLRGNSLKNIPEGLFLPLTNLKRL
DLSSNYLAYTIRNATFFTELKQLTWISLIYNFQPLKTFHELILSPHLGNVSNLGTLLLSG
NFFSTVPEKSLVVLSRLQKLKTLEMRMNFLFYYNMSTLGMLPSLTRLDLSQNILSYLPCN
VSPGYSLEQGCQDPKVFKYFPDSPMLPVSAHGQKFCRNNLTINLSQNNVIFLHEDVFDGM
ENVVCLNLSYNYASQALKGRLFIHLKSLVYLDMSYNRIDLYHKEAFTELNKTLKVLDLSH
NEYHFRMMGMGHRLEFIQSLTNLEVLNLANNGIGTHIDPRLSSNSVEYMYFSGNHLNIMW
QEGEGQTYIHFFQDLRKLIYLDISHNHLYSVEQHILCNLPVSLQALSISNNALHYFSWPN
LTCLGNLSYLNLSVNHLSFLPYSFTEFPPDLHILDLSSNKITHLPDQFLSQAKALQCLYL
NTNRLVVLNLQSLPTLLTNGTYFQLLTLHDNPFSCDCYNSGLEVFLRTSHTRIPHLTTAV
QCEFPESLQGQSVLTVDLRSCQEIYGGLAFLLSTLFTCAFIALPLLRHLYGWDVWYCLQI
LWAGCKGYLHPSASCSPKHYDAFVVFDTNNQAVRDWVYNELVIRLESSGYRRFSLCLEER
DWIPGLSCIENLHNAVHSSGKTVFVLSNGTRNDVGEATVNGVIRQTFFMVQQRLLDEKVD
VAVLILLDKMFPKLKYLQLRTRLCRKSVMSWPRNPQAQPLFWNQMRTALSSDNLKLYDNN
ISEG
Download sequence
Identical sequences ENSGMOP00000003436

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]