SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000019978 from Gadus morhua 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000019978
Domain Number 1 Region: 908-1037,1069-1279
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 6.67e-64
Family p120GAP domain-like 0.00057
Further Details:      
 
Domain Number 2 Region: 16-178
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 3.27e-37
Family Calponin-homology domain, CH-domain 0.0000226
Further Details:      
 
Domain Number 3 Region: 1499-1596
Classification Level Classification E-value
Superfamily RGC domain-like 8.89e-29
Family RGC domain 0.0000145
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000019978   Gene: ENSGMOG00000018543   Transcript: ENSGMOT00000020468
Sequence length 1596
Comment pep:known_by_projection genescaffold:gadMor1:GeneScaffold_4652:10662:39908:-1 gene:ENSGMOG00000018543 transcript:ENSGMOT00000020468 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ERLTADEMDQQRIQNVAYQYLCRLEEAKRWMEACLGEELPAPTELEEGLRNGVWLAKLAH
HFSPNTTPLRKIYDVDQNRYKAQGLQFRHTDNINHWRNAMAQVGLPTIFHPETTDIYDRK
NMPRAVYCIHALSMYLFRLGLAPQIQDLYGKVQFTAEEEINNMKLELDKYGIQMPSFSKI
GGLLANELSVDQAAVHAAVLAINEAVVQGDVGATALALRNPNAMLERLQGALMAVYQEML
QQARNAKKKDMYEEYLSQSEIQDNINKVNVRSAVELVDEALESGQEVELLSALQLPALKL
QALRAEHSPWYLDQLTSARQHCLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQDAVRC
INVALQRADSTQTLRCLLNSDAMLPDVLPFAAALYHQQLQLLQRQHPEGELQQEELYVAV
EMLTAVAMVNQALEAEDLRSFCFSLRSATAGLSDIHDDLLHRYFEELLGLRSRTGRVLLT
WNQLQEGITSVNIAAEEDQQRDLVLDLLQQALEGGDPRQVLSALLQPSSGVEDVVPANAS
RYLHLLTHAQRLKAQRSGDPRAELSLAEVQEAVRRANQQTQRAMKLALAAVNQAVKEGRA
DQTLRVLRLPEMALEGVAPECSAAYQKQLRSLLSSKAQRGDNRSPWVRSQTADGAFYFHL
SRLEGNWDKPKGFTQNALFLTNQEIQRREDLLVLLQARSRGFLLRQRLSSRLLYLRSQGA
AATVIQSHWRRVMQQKAYRQRIQFLYGHWRAVVKIQASMLLARRRYRARLRYFRDHVAAI
VKIQAFFRASRAREEYRMLVHSATPPLAVVRKFVHLLETGDGDIMQEAELLHLRQDVVTT
IRSNRQLEADLDLMDLKIGLLVRNRLTLQEVVSHCKKLTKKNKEQLAGMMALERSKGLKA
LHKRCRDRLETYQHLFYLLQTQPLYLAQLIFLMPQTKSTRFMETLVFSLFNYGSDSREAF
LLLQLFTAALRYEIRLKVEQPQEVVTGNPTVFKMLVSFYRHARGHNALRQILGSAVKDVL
SDGALSIRTDPLEIYKTWINQTETRTGTKSSLPYDVSAEDALSHPEVRRRLDIAIINLKN
LTDRVFIAITTNLYKLPYGLRYTAKVLRDALHSKFPEASQEELYKIVGNLIYYRYMNPAI
VAPDGFDVLEISAGSTLLPEQRRVLGSIARMLQHAAANKHFQGDSPHIQNLNEYISHTHG
RFRKFLQAVCDVPEPEERFNMDEYSEMVILNKPVVYISIGELLNTHKLLLEHQEALGPSP
SDPLRVLLGELGGVPSLEELLGXXXXXXXXXXXXXKMEVSLTLTSRFDVFSDQDQSDSRG
VLLSTKQLIVDLLRTQSGDSLSQLLRASTSRDQELQHGWMMQRRAQRDARTPDKMKRNQS
LVADGNLSLEEKKRKIVRSLRRLEALGVLTPPDSEAQILQMIAKDIRHQRLYRQRRRADT
LRLKQTLSSLQEKSSAHSQQVDYYSQYITSCLDSLTASKAAGEETAKSSGKSSGKKRPSL
SYSAARLQEKGVLLEIQDLPATXFKNVMFDIVAGQQTGSFQVKTRFLGVEMEEFPLKYQD
LLQLQYEGVAVMKMFDKAKINVNLLIFLLNKKFFKK
Download sequence
Identical sequences ENSGMOP00000019978 ENSGMOP00000019978

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]